RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 EIF5AP63241 154 aaKnown RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 TTLL9Q3SXZ7 439 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 PLPPR4Q7Z2D5 763 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 FAM129CQ86XR2 697 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 FAM98AQ8NCA5 519 aaKnown RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 M1APQ8TC57 530 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SORCS1Q8WY21 1168 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 GALNT14Q96FL9 552 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 BPTFQ12830 3046 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 NAP1L6A6NFF2 107 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 MFNGO00587 321 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 GMFGO60234 142 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ECI2O75521 394 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OR2J2O76002 312 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 C1QCP02747 245 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OPN1MWP04001 364 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SMIM10L2AP0DMW4 78 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SMIM10L2BP0DMW5 78 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OPN1MW2P0DN77 364 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OPN1MW3P0DN78 364 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 IFNGR2P38484 337 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 CAV2P51636 162 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 FGF8P55075 233 aaPredicted RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 OR10A3P58181 314 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ACTBP60709 375 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ACTA2P62736 377 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ACTG1P63261 375 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ACTG2P63267 376 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ACTC1P68032 377 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ACTA1P68133 377 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 FBXO47Q5MNV8 452 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ELFN2Q5R3F8 820 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SFXN4Q6P4A7 337 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF705AQ6ZN79 300 aaPredicted RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 CCDC117Q8IWD4 279 aaPredicted RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 PNLDC1Q8NA58 520 aaKnown RBP8.62□□□□□ -1.03
PTPRA-204ENST00000380393 TMED6Q8WW62 240 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 ADGRG7Q96K78 797 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 SLC39A8Q9C0K1 460 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 CSTL1Q9H114 145 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 DYRK1BQ9Y463 629 aa8.62□□□□□ -1.03
PTPRA-204ENST00000380393 YLPM1P49750 1951 aaKnown RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF724A8MTY0 619 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 TLX2O43763 284 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 MT-ND5P03915 603 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 EPHA1P21709 976 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 S100A3P33764 101 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HMGCS1Q01581 520 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR7A5Q15622 319 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ZNF750Q32MQ0 723 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 C18orf21Q32NC0 220 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 GXYLT1Q4G148 440 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 MFSD14CQ5VZR4 134 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR2T2Q6IF00 324 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 WDR73Q6P4I2 378 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HEPN1Q6WQI6 88 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 B3GALNT2Q8NCR0 500 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR8J1Q8NGP2 316 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR14K1Q8NGZ2 314 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 STAG3L4Q8TBR4 150 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 SMIM4Q8WVI0 70 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 DNAJB3Q8WWF6 145 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ATOH8Q96SQ7 321 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 RNF2Q99496 336 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 FBXW11Q9UKB1 542 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ARL5AQ9Y689 179 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 COLEC10Q9Y6Z7 277 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 UNC80Q8N2C7 3258 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 A0A087WUJ7 227 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 RFXANKO14593 260 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HBP1O60381 514 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 IGFBP1P08833 259 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 VSIG10L2P0DP72 767 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ERVFC1-1P60608 527 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 AIMP2Q13155 320 aaKnown RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 ATP6V1FQ16864 119 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 UBE2R2Q712K3 238 aaPredicted RBP8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR4C15Q8NGM1 316 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR1L6Q8NGR2 347 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR13C4Q8NGS5 318 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 OR13C8Q8NGS7 320 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 NUDCD2Q8WVJ2 157 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 KIRREL1Q96J84 757 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 TREX1Q9NSU2 369 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 TVP23BQ9NYZ1 205 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 TRBV11-1A0A0K0K1C0 115 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 TMEM129A0AVI4 362 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 NKX6-3A6NJ46 265 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 HEPACAM2A8MVW5 462 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 C9JQL5 133 aa8.61□□□□□ -1.03
PTPRA-204ENST00000380393 PYCARD-AS1I3L0S3 204 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms