RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TSSK2Q96PF2 358 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 HMG20AQ9NP66 347 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 A0A0A6YYJ9 748 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 K7ESF4 209 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 SIGLEC6O43699 453 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 RAB36O95755 333 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 LALBAP00709 142 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 HNF1AP20823 631 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ACVR1BP36896 505 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CDK5Q00535 292 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ODF4Q2M2E3 257 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF404Q494X3 552 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 LUZP2Q86TE4 346 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 MARCH3Q86UD3 253 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF595Q8IYB9 648 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CLDN22Q8N7P3 220 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 PTPMT1Q8WUK0 201 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CTHRC1Q96CG8 243 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 CCDC74BQ96LY2 380 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 FUZQ9BT04 418 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 TAPBPLQ9BX59 468 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 PRDM9Q9NQV7 894 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 PLCXD1Q9NUJ7 323 aa9.89□□□□□ -0.83
NEDD9-201ENST00000379433 BOD1L1Q8NFC6 3051 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 A0A087WV62 115 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 DYRK3O43781 588 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 PTBP3O95758 552 aaKnown RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 IL12BP29460 328 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 RPS19P39019 145 aaKnown RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 STAT5AP42229 794 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 GMFBP60983 142 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 ERVK-25P63136 954 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 DECR1Q16698 335 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 HLA-BQ31612 363 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 DHRS4L2Q6PKH6 230 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SIRT6Q8N6T7 355 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 C1orf216Q8TAB5 229 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SLC2A12Q8TD20 617 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 FCGR1BQ92637 280 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 GON7Q9BXV9 100 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 POLDIP3Q9BY77 421 aaKnown RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 RTN4RQ9BZR6 473 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 FAM212BQ9NTI7 297 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 IER3IP1Q9Y5U9 82 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 J3QLW9 94 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SCDO00767 359 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 PRODHO43272 600 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SGCEO43556 437 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 NKX2-2O95096 273 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 WISP1O95388 367 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 GLB1P16278 677 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF19P17023 458 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 TOMM34Q15785 309 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM44Q2T9K0 475 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 ARL9Q6T311 187 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 RASSF6Q6ZTQ3 369 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 KDM8Q8N371 416 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 FAM83FQ8NEG4 500 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SPRYD4Q8WW59 207 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 ZNF578Q96N58 590 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 DCLRE1CQ96SD1 692 aaKnown RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SLIRPQ9GZT3 109 aaKnown RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 DNAJB12Q9NXW2 375 aaKnown RBP9.88□□□□□ -0.83
NEDD9-201ENST00000379433 FER1L5A0AVI2 2057 aa9.88□□□□□ -0.83
NEDD9-201ENST00000379433 SVILO95425 2214 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ELOA3DA6NLF2 546 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 A8MXE2 369 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 DSCR3O14972 297 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SURF4O15260 269 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ICOSLGO75144 302 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 FXYD6P3P58550 94 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SNRPGP62308 76 aaKnown RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 PSPHP78330 225 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 CCL7P80098 99 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 TAB1Q15750 504 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ELOA3BQ3SY89 546 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 FAM27D1Q5T7N8 215 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 TMEM99Q8N816 258 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 ELOA3Q8NG57 546 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 RASD2Q96D21 266 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 NUDT9Q9BW91 350 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SLC25A19Q9HC21 320 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 KRCC1Q9NPI7 259 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 GRIP1Q9Y3R0 1128 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 CDH10Q9Y6N8 788 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 LILRA5A6NI73 299 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 PRR23D1E9PI22 279 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 DIRAS3O95661 229 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 PRR23D2P0DMB1 279 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 FPR3P25089 353 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 SDC2P34741 201 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 TALDO1P37837 337 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 IFITM3Q01628 133 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 FOXO1Q12778 655 aa9.87□□□□□ -0.83
NEDD9-201ENST00000379433 HNRNPA0Q13151 305 aaKnown RBP9.87□□□□□ -0.83
NEDD9-201ENST00000379433 C1QL3Q5VWW1 255 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms