RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CBLP22681 906 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 NR4A1P22736 598 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 HOXC5Q00444 222 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 ALKBH6Q3KRA9 238 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 GKAP1Q5VSY0 366 aaPredicted RBP15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 SERPINA11Q86U17 422 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 LRP11Q86VZ4 500 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 LRRC34Q8IZ02 419 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 CLIP4Q8N3C7 705 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 OR51F2Q8NH61 342 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 TEX37Q96LM6 180 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 NUF2Q9BZD4 464 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF275Q9NSD4 429 aaPredicted RBP15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 SPEF1Q9Y4P9 236 aa15.3■□□□□ 0.04
PDLIM4-202ENST00000379018 MEGF8Q7Z7M0 2845 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 LBPP18428 481 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 UFM1P61960 85 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 IFFO1Q0D2I5 559 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 DPY19L1Q2PZI1 675 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 MFSD8Q8NHS3 518 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 RDH5Q92781 318 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 YIPF5Q969M3 257 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 KTI12Q96EK9 354 aaPredicted RBP15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 OR52E6Q96RD3 313 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 CACYBPQ9HB71 228 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 MYEF2Q9P2K5 600 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 P2RX2Q9UBL9 471 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 RCE1Q9Y256 329 aa15.29■□□□□ 0.04
PDLIM4-202ENST00000379018 WNK2Q9Y3S1 2297 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 A0A096LPI6 279 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 A0A1W2PPW3 197 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 TMEM89A2RUT3 159 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF99A8MXY4 864 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 RPL36A-HNRNPH2H7BZ11 118 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 M0R082 166 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF432O94892 652 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 TFP02787 698 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 MYZAPP0CAP1 466 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 NAT2P11245 290 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 ACHEP22303 614 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 CRATP43155 626 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 PTDSS1P48651 473 aaKnown RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 COMPP49747 757 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 HILS1P60008 231 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 LARS2Q15031 903 aaKnown RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 MAPK11Q15759 364 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 GSG1Q2KHT4 349 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 TRMT5Q32P41 509 aaKnown RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 SLC9B1Q4ZJI4 515 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 PHYHD1Q5SRE7 291 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 IL17RDQ8NFM7 739 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF417Q8TAU3 575 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 STK35Q8TDR2 534 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 FAM216AQ8WUB2 273 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 OXGR1Q96P68 337 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 ZIM3Q96PE6 472 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF587Q96SQ5 575 aaPredicted RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 PTDSS2Q9BVG9 487 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 RBM4Q9BWF3 364 aaKnown RBP15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 MS4A5Q9H3V2 200 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 B3GAT1Q9P2W7 334 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 DUSP13Q9UII6 198 aa15.28■□□□□ 0.04
PDLIM4-202ENST00000379018 FTCDNL1E5RQL4 147 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 CDC14BO60729 498 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 NPIPB7O75200 414 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 NCR1O76036 304 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 PNPP00491 289 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 ETFAP13804 333 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 IL12AP29459 219 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 CRISP3P54108 245 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 AQP5P55064 265 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 ABCE1P61221 599 aaKnown RBP15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 GALK2Q01415 458 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 AVPI1Q5T686 147 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF813Q6ZN06 617 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 ZNF771Q7L3S4 317 aaPredicted RBP15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 RIBC1Q8N443 379 aaPredicted RBP15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 PIK3C3Q8NEB9 887 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 MGARPQ8TDB4 240 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 OR2M2Q96R28 347 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 EMC6Q9BV81 110 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 RPS6KB2Q9UBS0 482 aa15.27■□□□□ 0.04
PDLIM4-202ENST00000379018 AIM2O14862 343 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 AKAP8O43823 692 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 KRT75O95678 551 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 AVPP01185 164 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 SERPINE1P05121 402 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 ALDOCP09972 364 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 B4GALT1P15291 398 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 ADRA2CP18825 462 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 GRPRP30550 384 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 TXNL4AP83876 142 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 MVKQ03426 396 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 EGR4Q05215 589 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 GLIPR1L2Q4G1C9 344 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 C1orf229Q6ZS94 237 aaPredicted RBP15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 ANKK1Q8NFD2 765 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 RNF217Q8TC41 542 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 SLC6A7Q99884 636 aa15.26■□□□□ 0.03
PDLIM4-202ENST00000379018 C20orf27Q9GZN8 174 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms