RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ASCC3Q8N3C0 2202 aaKnown RBP18.35■□□□□ 0.53
VSX1-202ENST00000376709 TRAV36DV7A0A075B6V5 113 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 A0A0G2JK05 382 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 TXNDC12O95881 172 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 TDGF1P13385 188 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 NR0B2Q15466 257 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 SLC25A35Q3KQZ1 300 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 MESTQ5EB52 335 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 RABEPKQ7Z6M1 372 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 TRMT10AQ8TBZ6 339 aaKnown RBP18.35■□□□□ 0.53
VSX1-202ENST00000376709 PIGKQ92643 395 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 UBL7Q96S82 380 aaPredicted RBP18.35■□□□□ 0.53
VSX1-202ENST00000376709 TGIF2Q9GZN2 237 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 CYSLTR2Q9NS75 346 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 TRAV1-2A0A0B4J238 106 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 A0A0G2JMP0 313 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 A0A0X1KG70 313 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 A0A1B0GTQ1 180 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 EIF4EP06730 217 aaKnown RBP18.35■□□□□ 0.53
VSX1-202ENST00000376709 NR4A2P43354 598 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 RNF4P78317 190 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 C1QL3Q5VWW1 255 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 SLC16A9Q7RTY1 509 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 SLC38A9Q8NBW4 561 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 OR4M2Q8NGB6 313 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 ITFG2Q969R8 447 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 SLC25A36Q96CQ1 311 aa18.35■□□□□ 0.53
VSX1-202ENST00000376709 LY6G6EA0A0G2JKS1 128 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 MEIOCA2RUB1 952 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 GATBO75879 557 aaKnown RBP18.34■□□□□ 0.53
VSX1-202ENST00000376709 PAHP00439 452 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 RENP00797 406 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 HEXBP07686 556 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 PRKAR1AP10644 381 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 PNLIPP16233 465 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 MAP2K3P46734 347 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 P2RX1P51575 399 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 QPRTQ15274 297 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 HLA-BQ31612 363 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 MZT2BQ6NZ67 158 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 EXD3Q8N9H8 876 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 OR6F1Q8NGZ6 308 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 OR2T4Q8NH00 348 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 SAP25Q8TEE9 199 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 NPFFR2Q9Y5X5 522 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 U3KQA8 63 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 PCNX3Q9H6A9 2034 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 OR6C70A6NIJ9 312 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 IDSB3KWA1 339 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 B4DXG7 233 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 C11orf98E9PRG8 122 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 DCTN6O00399 190 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 FLRT2O43155 660 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 SIGLEC6O43699 453 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 GPRIN2O60269 458 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 FADS1O60427 444 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 BGLAPP02818 100 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 CD1AP06126 327 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 RBMS1P29558 406 aaKnown RBP18.34■□□□□ 0.53
VSX1-202ENST00000376709 KIR2DL3P43628 341 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 RPS11P62280 158 aaKnown RBP eCLIP18.34■□□□□ 0.53
VSX1-202ENST00000376709 NKAIN1Q4KMZ8 207 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 GPR139Q6DWJ6 353 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 UTS2BQ765I0 119 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 FAM220AQ7Z4H9 259 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 RDH10Q8IZV5 341 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 OR4M1Q8NGD0 313 aa18.34■□□□□ 0.53
VSX1-202ENST00000376709 PRMT8Q9NR22 394 aaPredicted RBP18.34■□□□□ 0.53
VSX1-202ENST00000376709 RBMX2Q9Y388 322 aaKnown RBP18.34■□□□□ 0.53
VSX1-202ENST00000376709 TMEM72A0PK05 275 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 SUSD5O60279 629 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 SCRG1O75711 98 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 TIAF1O95411 115 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 UCHL1P09936 223 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 POLR2HP52434 150 aaKnown RBP18.33■□□□□ 0.52
VSX1-202ENST00000376709 ZXDAP98168 799 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 MAMDC2Q7Z304 686 aaPredicted RBP18.33■□□□□ 0.52
VSX1-202ENST00000376709 SYT9Q86SS6 491 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 DTX3Q8N9I9 347 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 DUSP19Q8WTR2 217 aa18.33■□□□□ 0.52
VSX1-202ENST00000376709 ADAD1Q96M93 576 aaKnown RBP18.33■□□□□ 0.52
VSX1-202ENST00000376709 TNRC6BQ9UPQ9 1833 aaKnown RBP18.33■□□□□ 0.52
VSX1-202ENST00000376709 TMED7-TICAM2A0A0A6YYA0 188 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 WISP1O95388 367 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 TACSTD2P09758 323 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 PSKH1P11801 424 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 NPR2P20594 1047 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 CCL7P80098 99 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 HSD17B12Q53GQ0 312 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 ZNF57Q68EA5 555 aaPredicted RBP18.32■□□□□ 0.52
VSX1-202ENST00000376709 PLET1Q6UQ28 207 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 C16orf47Q6ZP98 133 aaPredicted RBP18.32■□□□□ 0.52
VSX1-202ENST00000376709 ANKRD37Q7Z713 158 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 OR6V1Q8N148 313 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 THAP3Q8WTV1 239 aaPredicted RBP18.32■□□□□ 0.52
VSX1-202ENST00000376709 HDHD2Q9H0R4 259 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 SYT4Q9H2B2 425 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 RNF121Q9H920 327 aa18.32■□□□□ 0.52
VSX1-202ENST00000376709 RBFOX1Q9NWB1 397 aaKnown RBP18.32■□□□□ 0.52
VSX1-202ENST00000376709 SUSD2Q9UGT4 822 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms