RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SELENONQ9NZV5 590 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 LEF1Q9UJU2 399 aaPredicted RBP18.32■□□□□ 0.52
VSX1-201ENST00000376707 TRIM33Q9UPN9 1127 aa18.32■□□□□ 0.52
VSX1-201ENST00000376707 TRAV36DV7A0A075B6V5 113 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 AKAP8O43823 692 aaKnown RBP18.31■□□□□ 0.52
VSX1-201ENST00000376707 TPST1O60507 370 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 ZNF432O94892 652 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 CECR9P0C854 216 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 HOXB1P14653 301 aaPredicted RBP18.31■□□□□ 0.52
VSX1-201ENST00000376707 SLC6A2P23975 617 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 GRPRP30550 384 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 ARF1P84077 181 aaKnown RBP18.31■□□□□ 0.52
VSX1-201ENST00000376707 NAAAQ02083 359 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 C3orf36Q3SXR2 165 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 ULK3Q6PHR2 472 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 SLC46A3Q7Z3Q1 461 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 GPR137CQ8N3F9 429 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 ANKK1Q8NFD2 765 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 BHLHE22Q8NFJ8 381 aaPredicted RBP18.31■□□□□ 0.52
VSX1-201ENST00000376707 SPATA3Q8NHX4 192 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 TSPEARQ8WU66 669 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 NELFAQ9H3P2 528 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 B3GAT1Q9P2W7 334 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 CRNNQ9UBG3 495 aaPredicted RBP18.31■□□□□ 0.52
VSX1-201ENST00000376707 SLC13A4Q9UKG4 626 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 NDUFAF1Q9Y375 327 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 ALPK2Q86TB3 2170 aa18.31■□□□□ 0.52
VSX1-201ENST00000376707 PRORSD1PA6NEY8 169 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 RPL36A-HNRNPH2H7BZ11 118 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 SASH3O75995 380 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 USF1P22415 310 aaPredicted RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 CBLP22681 906 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 PDLIM4P50479 330 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 RGS8P57771 180 aaPredicted RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 GLIPR1L2Q4G1C9 344 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 METTL21CQ5VZV1 264 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 FAM91A1Q658Y4 838 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 VHLLQ6RSH7 139 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 H1FNTQ75WM6 255 aaPredicted RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 NET1Q7Z628 596 aaPredicted RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 HIPK4Q8NE63 616 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 PIK3C3Q8NEB9 887 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 SLC47A1Q96FL8 570 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 THOC1Q96FV9 657 aaKnown RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 SORCS2Q96PQ0 1159 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 ZNF607Q96SK3 696 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 KCNK17Q96T54 332 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 VRK1Q99986 396 aaPredicted RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 PRR14Q9BWN1 585 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 NPHS2Q9NP85 383 aa18.3■□□□□ 0.52
VSX1-201ENST00000376707 TESQ9UGI8 421 aaKnown RBP18.3■□□□□ 0.52
VSX1-201ENST00000376707 ANK3Q12955 4377 aaKnown RBP18.29■□□□□ 0.52
VSX1-201ENST00000376707 IGKV1D-42A0A075B6H8 117 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 B9A039 149 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 SERPINB7O75635 380 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 PDE5AO76074 875 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 IGLV1-44P01699 117 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 OR4A8P0C604 315 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 NQO1P15559 274 aaKnown RBP18.29■□□□□ 0.52
VSX1-201ENST00000376707 PCBP3P57721 371 aaKnown RBP18.29■□□□□ 0.52
VSX1-201ENST00000376707 CYB5R2Q6BCY4 276 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 DHDDSQ86SQ9 333 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 RETREG3Q86VR2 466 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 FAM169BQ8N8A8 192 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 OR4F15Q8NGB8 312 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 ANKRD27Q96NW4 1050 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 OR2M2Q96R28 347 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 EVA1AQ9H8M9 152 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 TMEM27Q9HBJ8 222 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 CRLF2Q9HC73 371 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 GPR35Q9HC97 309 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 KLHL14Q9P2G3 628 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 CDC42EP3Q9UKI2 254 aa18.29■□□□□ 0.52
VSX1-201ENST00000376707 HEATR1Q9H583 2144 aaKnown RBP18.29■□□□□ 0.52
VSX1-201ENST00000376707 ANGPT2O15123 496 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 MFN2O95140 757 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 CBR1P16152 277 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 AQP1P29972 269 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 LSM11P83369 360 aaKnown RBP eCLIP18.28■□□□□ 0.52
VSX1-201ENST00000376707 RBBP4Q09028 425 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 MFSD13AQ14CX5 517 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 ADIPOQQ15848 244 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 CARTPTQ16568 116 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 CEACAM16Q2WEN9 425 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 PTOV1Q86YD1 416 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 ARMC8Q8IUR7 673 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 UEVLDQ8IX04 471 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 C11orf65Q8NCR3 313 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 ADPRHL1Q8NDY3 354 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 EPYCQ99645 322 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 CGREF1Q99674 301 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 PIMREGQ9BSJ6 248 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 SEC61A2Q9H9S3 476 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 ANGPT4Q9Y264 503 aa18.28■□□□□ 0.52
VSX1-201ENST00000376707 ATRQ13535 2644 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 A0A0G2JND7 137 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 LOC102725191A0A1B0GVB3 256 aa18.27■□□□□ 0.52
VSX1-201ENST00000376707 NDUFS8O00217 210 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms