RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 VWC2LB2RUY7 222 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 PHF1O43189 567 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 UPK3AO75631 287 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 C8BP07358 591 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 PRG2P13727 222 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 NQO1P15559 274 aaKnown RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 MAGOHP61326 146 aaKnown RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 CARTPTQ16568 116 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 SWT1Q5T5J6 900 aaKnown RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 DHRS4L2Q6PKH6 230 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 UEVLDQ8IX04 471 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 SCAIQ8N9R8 606 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 VPS33AQ96AX1 596 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 PTDSS2Q9BVG9 487 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 PAIP1Q9H074 479 aaKnown RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 DENND2DQ9H6A0 471 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-204ENST00000376643 TMEM27Q9HBJ8 222 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 TCF7L2Q9NQB0 619 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 USH1CQ9Y6N9 552 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 FBN3Q75N90 2809 aa12.83□□□□□ -0.36
HDAC6-204ENST00000376643 ALPK2Q86TB3 2170 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 A0A096LPE4 126 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 LOC100289279A0A1B0GTE1 492 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 A0A1W2PPZ6 126 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF99A8MXY4 864 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF432O94892 652 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 NPR2P20594 1047 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 PCMT1P22061 227 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 SLC6A2P23975 617 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 CDK6Q00534 326 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 POU3F1Q03052 451 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-204ENST00000376643 SQLEQ14534 574 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 GTDC1Q4AE62 458 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 LRIF1Q5T3J3 769 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 REP15Q6BDI9 236 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 VHLLQ6RSH7 139 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 RANBP3LQ86VV4 465 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-204ENST00000376643 OR9I1Q8NGQ6 314 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 HPS1Q92902 700 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 KTI12Q96EK9 354 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-204ENST00000376643 LRR1Q96L50 414 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 C7orf26Q96N11 449 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 OR52B2Q96RD2 323 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 DYNLRB1Q9NP97 96 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 NOX1Q9Y5S8 564 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 GMEB1Q9Y692 573 aa12.82□□□□□ -0.36
HDAC6-204ENST00000376643 A0A1B0GWA3 101 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 hCG_2039718K7EN88 272 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 M0R082 166 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 ARAFP10398 606 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF23P17027 643 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 LSP1P33241 339 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 CAPZA2P47755 286 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 CHN2P52757 468 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 RGS8P57771 180 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-204ENST00000376643 RPS23P62266 143 aaKnown RBP12.81□□□□□ -0.36
HDAC6-204ENST00000376643 ARF1P84077 181 aaKnown RBP12.81□□□□□ -0.36
HDAC6-204ENST00000376643 EGR4Q05215 589 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 CEACAM16Q2WEN9 425 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 SLC2A7Q6PXP3 512 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 EPGNQ6UW88 154 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 PHC2Q8IXK0 858 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 RNF217Q8TC41 542 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 SPDL1Q96EA4 605 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-204ENST00000376643 CCDC28BQ9BUN5 200 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 TMEM38AQ9H6F2 299 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 ANGPT4Q9Y264 503 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 STAB1Q9NY15 2570 aa12.81□□□□□ -0.36
HDAC6-204ENST00000376643 A0A087WUJ7 227 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF726A6NNF4 738 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 MT-ATP6P00846 226 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 GRPRP30550 384 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 EVX1P49640 407 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 NPRL3Q12980 569 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 DAG1Q14118 895 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 LIPNQ5VXI9 398 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 BLOC1S3Q6QNY0 202 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 MAVSQ7Z434 540 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 SPATA21Q7Z572 469 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 NFKBIDQ8NI38 313 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 LRRC8CQ8TDW0 803 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 MAL2Q969L2 176 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 TLCD1Q96CP7 247 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 FOXN4Q96NZ1 517 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 OR2M2Q96R28 347 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 NELFAQ9H3P2 528 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 CHODLQ9H9P2 273 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 B3GAT1Q9P2W7 334 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 POFUT2Q9Y2G5 429 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms