RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PPP2CAP67775 309 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TNFRSF17Q02223 184 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 SIGLEC14Q08ET2 396 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 GXYLT1Q4G148 440 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 PWWP2BQ6NUJ5 590 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TFAP2EQ6VUC0 442 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 C17orf107Q6ZR85 190 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 BVESQ8NE79 360 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 MRGPRX1Q96LB2 322 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 CMTM3Q96MX0 182 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TMPRSS13Q9BYE2 586 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 LDAHQ9H6V9 325 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 OPN4Q9UHM6 478 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 GPR160Q9UJ42 338 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 CACNA1CQ13936 2221 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 A0A087WV48 116 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 A0A1B0GWA3 101 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 GXYLT2A0PJZ3 443 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TMIGD3P0DMS9 266 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-203ENST00000374877 ART1P52961 327 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 H2BFSP57053 126 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 C2orf68Q2NKX9 166 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 OLFML2AQ68BL7 652 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 ZNF613Q6PF04 617 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 ZC3H14Q6PJT7 736 aaKnown RBP10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TMEM92Q6UXU6 159 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TMEFF1Q8IYR6 380 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 POMGNT2Q8NAT1 580 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 DNAAF1Q8NEP3 725 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TNFAIP8L1Q8WVP5 186 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 ZNRF4Q8WWF5 429 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 TCF7L1Q9HCS4 588 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 IFT46Q9NQC8 304 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 RABL2AQ9UBK7 228 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-203ENST00000374877 RABL2BQ9UNT1 228 aa10.15□□□□□ -0.78
CCDC40-203ENST00000374877 SNRPGP15A8MWD9 76 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 LDB3O75112 727 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 IGLV3-19P01714 112 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 NGFRP08138 427 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 VSIG10L2P0DP72 767 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 GABRA3P34903 492 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 ADH7P40394 386 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 TSFMP43897 325 aaKnown RBP10.15□□□□□ -0.79
CCDC40-203ENST00000374877 TAS2R20P59543 309 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 EXOSC7Q15024 291 aaKnown RBP10.15□□□□□ -0.79
CCDC40-203ENST00000374877 PCGF3Q3KNV8 242 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 LRFN4Q6PJG9 635 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 SYT13Q7L8C5 426 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 EID2Q8N6I1 236 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 OR4E2Q8NGC2 313 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 GAL3ST3Q96A11 431 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 DMRTA2Q96SC8 542 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 NMNAT3Q96T66 252 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 MFRPQ9BY79 579 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 CDH23Q9H251 3354 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 MED9Q9NWA0 146 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 GLS2Q9UI32 602 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 FBXL3Q9UKT7 428 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF281Q9Y2X9 895 aa10.15□□□□□ -0.79
CCDC40-203ENST00000374877 OR6C65A6NJZ3 312 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 GPR89AB7ZAQ6 455 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 ZFPL1O95159 310 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 IL5P05113 134 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 FGF2P09038 288 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 GPR89BP0CG08 455 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 LGALS3BPQ08380 585 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 ALG10BQ5I7T1 473 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 VN1R4Q7Z5H5 301 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 ZAR1Q86SH2 424 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 SHISA5Q8N114 240 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 FLRT3Q9NZU0 649 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 TCRBV21S2A2A0A5A6 115 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 MCIDASD6RGH6 385 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 F5H5P2 479 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 GPRIN2O60269 458 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 SDC3O75056 442 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 CPMP14384 443 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 TLX1P31314 330 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-203ENST00000374877 NANOS3P60323 173 aaKnown RBP10.14□□□□□ -0.79
CCDC40-203ENST00000374877 TFF2Q03403 129 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 UNQ9370/PRO34162Q6UXP9 181 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 TMPRSS12Q86WS5 348 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 RELL2Q8NC24 303 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-203ENST00000374877 OR1S1Q8NH92 325 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 OR14C36Q8NHC7 312 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 MAFAQ8NHW3 353 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-203ENST00000374877 PNPLA2Q96AD5 504 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 HAVCR1Q96D42 359 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 TEX101Q9BY14 249 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 TMEM74BQ9NUR3 256 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 KLF15Q9UIH9 416 aa10.14□□□□□ -0.79
CCDC40-203ENST00000374877 MEIS3P1A6NDR6 274 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 C10orf142B7Z368 130 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 SULT1B1O43704 296 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 IGF2P01344 180 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 GABRG2P18507 467 aa10.13□□□□□ -0.79
CCDC40-203ENST00000374877 RPS4Y1P22090 263 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms