RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MAZP56270 477 aaKnown RBP12.71□□□□□ -0.37
HMGCL-203ENST00000374490 AP3S2P59780 193 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ERVK-25P63136 954 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 MAT1AQ00266 395 aaKnown RBP12.71□□□□□ -0.37
HMGCL-203ENST00000374490 GRM7Q14831 915 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF74Q16587 644 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 NDUFAF6Q330K2 333 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 LEG1Q6P5S2 330 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 LRRC75AQ8NAA5 344 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 OR51Q1Q8NH59 317 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 SMAP2Q8WU79 429 aaPredicted RBP12.71□□□□□ -0.37
HMGCL-203ENST00000374490 SMIM4Q8WVI0 70 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 SLC46A1Q96NT5 459 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 OR14A2Q96R54 314 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ALG12Q9BV10 488 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 SLITRK2Q9H156 845 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ING4Q9UNL4 249 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 COPS3Q9UNS2 423 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 BOLA1Q9Y3E2 137 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 PCDHGA9Q9Y5G4 932 aaKnown RBP12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ARHGEF17Q96PE2 2063 aaPredicted RBP12.71□□□□□ -0.38
HMGCL-203ENST00000374490 TEX13CA0A0J9YWL9 993 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 OR6C68A6NDL8 312 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 AIPO00170 330 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 SULT1B1O43704 296 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CPNE3O75131 537 aaKnown RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF780AO75290 641 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CDC123O75794 336 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ALX3O95076 343 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ECDO95905 644 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CLPSP04118 112 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 WNT1P04628 370 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 MAOAP21397 527 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 MAOBP27338 520 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 SDHAP31040 664 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 HCCSP53701 268 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 DCAF7P61962 342 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 SKP2Q13309 424 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CSRP2Q16527 193 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 BTBD16Q32M84 506 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF684Q5T5D7 378 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 FAM69AQ5T7M9 428 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 GPR139Q6DWJ6 353 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 LYPD4Q6UWN0 246 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 BTN2A1Q7KYR7 527 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 THRSPQ92748 146 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 RASD2Q96D21 266 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 SLC38A3Q99624 504 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 GHITMQ9H3K2 345 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NANSQ9NR45 359 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 RNF215Q9Y6U7 377 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 DNAH14Q0VDD8 3507 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 TDRD6O60522 2096 aaKnown RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NCOR2Q9Y618 2525 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 A0A0A6YYJ9 748 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 A0A1W2PR77 199 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 FRG2CA6NGY1 282 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 C17orf105B2RV13 164 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 K7ESF4 209 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 PHYHO14832 338 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF264O43296 627 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 OR2B3O76000 313 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CALCBP10092 127 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ANXA3P12429 323 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NME1P15531 152 aaKnown RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 SRMP19623 302 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 DMWDQ09019 674 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NNATQ16517 81 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ALG10Q5BKT4 473 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 BCL2L15Q5TBC7 163 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 LINC01590Q5TEZ4 76 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 ZNF782Q6ZMW2 699 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-203ENST00000374490 SIAH3Q8IW03 269 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 C10orf53Q8N6V4 93 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 EXD3Q8N9H8 876 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 OR51L1Q8NGJ5 315 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 OR2T4Q8NH00 348 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 MOSPD2Q8NHP6 518 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 LGALS14Q8TCE9 139 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 DEDD2Q8WXF8 326 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 OR1F2PQ96R84 312 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 CACNG6Q9BXT2 260 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 TTTY10Q9BZA0 68 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 LAT2Q9GZY6 243 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 RAB33BQ9H082 229 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 OR51J1Q9H342 316 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NOX4Q9NPH5 578 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 DIABLOQ9NR28 239 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 NUDT15Q9NV35 164 aa12.7□□□□□ -0.38
HMGCL-203ENST00000374490 AK6Q9Y3D8 172 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms