RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZCCHC18P0CG32 403 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 HNRNPCL4P0DMR1 293 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 IFNGR1P15260 489 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 SNTB2Q13425 540 aaKnown RBP11.9□□□□□ -0.5
CXCL12-202ENST00000374426 CCNIQ14094 377 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 DAG1Q14118 895 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 MSMPQ1L6U9 139 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 KRT80Q6KB66 452 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 MEX3DQ86XN8 651 aaKnown RBP11.9□□□□□ -0.5
CXCL12-202ENST00000374426 TMEM123Q8N131 208 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 GPR137CQ8N3F9 429 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 OXGR1Q96P68 337 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 OR2M2Q96R28 347 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 TPK1Q9H3S4 243 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.5
CXCL12-202ENST00000374426 M0R082 166 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 TRAF3IP2O43734 574 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 IL6P05231 212 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 NUDT7P0C024 238 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 GTF2E2P29084 291 aaKnown RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 IL1RL1Q01638 556 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 POU3F1Q03052 451 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 C1DQ13901 141 aaKnown RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF311Q5JNZ3 666 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 PHYHD1Q5SRE7 291 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 C6orf89Q6UWU4 347 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 CCDC36Q8IYA8 594 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 PIK3C3Q8NEB9 887 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 IL17RDQ8NFM7 739 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF417Q8TAU3 575 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 TAAR8Q969N4 342 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF587Q96SQ5 575 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 RSPO3Q9BXY4 272 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-202ENST00000374426 ARMC7Q9H6L4 198 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 B3GNT2Q9NY97 397 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 IFT52Q9Y366 437 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 CMAHPQ9Y471 501 aa11.89□□□□□ -0.51
CXCL12-202ENST00000374426 IGKV1D-42A0A075B6H8 117 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF99A8MXY4 864 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 AIM2O14862 343 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 HDAC3O15379 428 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 SLC22A3O75751 556 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 ANP32DO95626 131 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 HLA-HP01893 362 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 IDO1P14902 403 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 NR4A1P22736 598 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 GRPRP30550 384 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 CAPZA2P47755 286 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 PDCD4Q53EL6 469 aaKnown RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 TNFAIP8L3Q5GJ75 292 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 ELFN2Q5R3F8 820 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 FAM69AQ5T7M9 428 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 RINLQ6ZS11 566 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 H1FNTQ75WM6 255 aaPredicted RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 MREGQ8N565 214 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 MAL2Q969L2 176 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 SLC35B4Q969S0 331 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 MRPL24Q96A35 216 aaKnown RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 MRPL37Q9BZE1 423 aaKnown RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 CACYBPQ9HB71 228 aaKnown RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 BCL2L10Q9HD36 194 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 THUMPD1Q9NXG2 353 aaKnown RBP11.88□□□□□ -0.51
CXCL12-202ENST00000374426 USP22Q9UPT9 525 aa11.88□□□□□ -0.51
CXCL12-202ENST00000374426 TMEM247A6NEH6 219 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 B4DSR2 109 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 M0R3G1 203 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 SYNGR3O43761 229 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 OR2T1O43869 369 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 VENTXO95231 258 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 HPRP00739 348 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 HLA-DOBP13765 273 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 HTR2AP28223 471 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 EVX1P49640 407 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 RGNQ15493 299 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 CARD17Q5XLA6 110 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 WDR93Q6P2C0 686 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 UGT2A3Q6UWM9 527 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 COMTD1Q86VU5 262 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 CARM1Q86X55 608 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 ITCHQ96J02 903 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 ZNF75AQ96N20 296 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 PAIP2Q9BPZ3 127 aaKnown RBP11.87□□□□□ -0.51
CXCL12-202ENST00000374426 C12orf10Q9HB07 376 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 KCNK9Q9NPC2 374 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 A4GALTQ9NPC4 353 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 SDR39U1Q9NRG7 319 aaPredicted RBP11.87□□□□□ -0.51
CXCL12-202ENST00000374426 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
CXCL12-202ENST00000374426 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 A0A1B0GWA3 101 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 TRPC5OSA6NMA1 111 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 MS4A18H0YCH9 400 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 M0R233 179 aa11.86□□□□□ -0.51
CXCL12-202ENST00000374426 AKAP8O43823 692 aaKnown RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 SNNO75324 88 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-202ENST00000374426 HPXP02790 462 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms