RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TMPRSS12Q86WS5 348 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 KLHDC8AQ8IYD2 350 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ACOT4Q8N9L9 421 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PXT1Q8NFP0 134 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 OR51D1Q8NGF3 324 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 OR5M9Q8NGP3 310 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 FCAMRQ8WWV6 532 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 RASD2Q96D21 266 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 BPIFA2Q96DR5 249 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ZC3H10Q96K80 434 aaKnown RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 HS6ST2Q96MM7 605 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 LMF1Q96S06 567 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ARHGDIGQ99819 225 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 DPYSL5Q9BPU6 564 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 CFHR5Q9BXR6 569 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PARP12Q9H0J9 701 aaKnown RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 WNT5BQ9H1J7 359 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 TLNRD1Q9H1K6 362 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 COA4Q9NYJ1 87 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 EDARQ9UNE0 448 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 HS3ST2Q9Y278 367 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF443Q9Y2A4 671 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PPIL1Q9Y3C6 166 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 FRMPD3Q5JV73 1810 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1B0GUH1 482 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1W2PPE3 182 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TVP23AA6NH52 213 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 C17orf51A8MQB3 221 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 DISC1C4P0D8 188 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 F5H5P2 479 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SYT5O00445 386 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ALOX12BO75342 701 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 LDOC1O95751 146 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TGM6O95932 706 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 GIPP09681 153 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SELLP14151 372 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 IFNGR1P15260 489 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 BMP7P18075 431 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 VAMP1P23763 118 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 NDUFS1P28331 727 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 STAT5AP42229 794 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 FRKP42685 505 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 WASP42768 502 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 NRG3P56975 720 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TAS2R20P59543 309 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SNRPEP62304 92 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 HTRA4P83105 476 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ACSM1Q08AH1 577 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 IKZF1Q13422 519 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 CDK5R1Q15078 307 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TEAD2Q15562 447 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR1Q1Q15612 314 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 AMZ1Q400G9 498 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 MRPL2Q5T653 305 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SLC22A10Q63ZE4 541 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PWWP2BQ6NUJ5 590 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 C17orf99Q6UX52 265 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 LRRC69Q6ZNQ3 347 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 RHOUQ7L0Q8 258 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF546Q86UE3 836 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR2AK2Q8NG84 335 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR4S1Q8NGB4 309 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR4N2Q8NGD1 307 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 BRIX1Q8TDN6 353 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ADAMTS15Q8TE58 950 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PAQR8Q8TEZ7 354 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM239Q8WW34 195 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 NSMAFQ92636 917 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 FGF13Q92913 245 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PNPLA2Q96AD5 504 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ELP4Q96EB1 424 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 WDR34Q96EX3 536 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 CD180Q99467 661 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TSNAXQ99598 290 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ELF4Q99607 663 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 KLHDC3Q9BQ90 382 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 RSRP1Q9BUV0 290 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF471Q9BX82 626 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PINK1Q9BXM7 581 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 BCL2L14Q9BZR8 327 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SLITRK2Q9H156 845 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 OR52A5Q9H2C5 316 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 BARX1Q9HBU1 254 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 KLHL9Q9P2J3 617 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 APOBEC3BQ9UH17 382 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PHF11Q9UIL8 331 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 LSM7Q9UK45 103 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PCDHB10Q9UN67 800 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 PLCL2Q9UPR0 1127 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 FARSAQ9Y285 508 aaKnown RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 SLC6A5Q9Y345 797 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 WDR45Q9Y484 360 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 IER3IP1Q9Y5U9 82 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 KLF2Q9Y5W3 355 aaPredicted RBP4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TRAV18A0A075B6X5 111 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3DA0A087WVF3 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3IA0A087WXS9 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3EA0A087X179 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 TBC1D3KA0A087X1G2 549 aa4.95□□□□□ -1.62
ATG4A-204ENST00000372246 A0A1B0GWJ7 208 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms