RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZNF432O94892 652 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 LGI1O95970 557 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 NPPAP01160 153 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 TROVE2P10155 538 aaKnown RBP eCLIP16.5■□□□□ 0.23
TMEM53-201ENST00000372235 AQP1P29972 269 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 PCBP3P57721 371 aaKnown RBP16.5■□□□□ 0.23
TMEM53-201ENST00000372235 SPOCK1Q08629 439 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 HIKESHIQ53FT3 197 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 OR4F15Q8NGB8 312 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 SLC41A3Q96GZ6 507 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 IKZF5Q9H5V7 419 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 ZNF385DQ9H6B1 395 aa16.5■□□□□ 0.23
TMEM53-201ENST00000372235 CRNNQ9UBG3 495 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-201ENST00000372235 USF3Q68DE3 2245 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 NF1P21359 2839 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 M0QX08 132 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 CHP2O43745 196 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 SLC25A16P16260 332 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 ARR3P36575 388 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 SNRPD2P62316 118 aaKnown RBP16.49■□□□□ 0.23
TMEM53-201ENST00000372235 SLC25A3Q00325 362 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 PMS2P3Q13401 168 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 MAPRE2Q15555 327 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 COQ5Q5HYK3 327 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 C10orf111Q8N326 155 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 KDM8Q8N371 416 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 MCHR1Q99705 422 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 KAT8Q9H7Z6 458 aaKnown RBP16.49■□□□□ 0.23
TMEM53-201ENST00000372235 MRPL39Q9NYK5 338 aaKnown RBP16.49■□□□□ 0.23
TMEM53-201ENST00000372235 B3GAT1Q9P2W7 334 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 GDF2Q9UK05 429 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-201ENST00000372235 MOKQ9UQ07 419 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 FKBP7Q9Y680 259 aa16.49■□□□□ 0.23
TMEM53-201ENST00000372235 IGKV1D-42A0A075B6H8 117 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 IGHV1-18A0A0C4DH31 117 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 ZNF726A6NNF4 738 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 OR6A2O95222 327 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 CBR1P16152 277 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 PCSK6P29122 969 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 EFNA4P52798 201 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 CDH12P55289 794 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 PUDPQ08623 228 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 GLIPR1L2Q4G1C9 344 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 PXKQ7Z7A4 578 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 PTOV1Q86YD1 416 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 C10orf53Q8N6V4 93 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 MPP4Q96JB8 637 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 ARHGDIGQ99819 225 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 SLC19A3Q9BZV2 496 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 DENND2DQ9H6A0 471 aaPredicted RBP16.48■□□□□ 0.23
TMEM53-201ENST00000372235 CRLF2Q9HC73 371 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 GPR35Q9HC97 309 aa16.48■□□□□ 0.23
TMEM53-201ENST00000372235 MYOZ1Q9NP98 299 aaPredicted RBP16.48■□□□□ 0.23
TMEM53-201ENST00000372235 BBIP1A8MTZ0 92 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 ZNF99A8MXY4 864 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-201ENST00000372235 ATP6V1G2-DDX39BF2Z307 99 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 IFNA14P01570 189 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 IGKV3-15P01624 115 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 PCGF2P35227 344 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 MTPNP58546 118 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 TRMT5Q32P41 509 aaKnown RBP16.47■□□□□ 0.23
TMEM53-201ENST00000372235 MMEL1Q495T6 779 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 TTC33Q6PID6 262 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-201ENST00000372235 B3GLCTQ6Y288 498 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 SMYD1Q8NB12 490 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 OR10H5Q8NGA6 315 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 NANOS1Q8WY41 292 aaKnown RBP16.47■□□□□ 0.23
TMEM53-201ENST00000372235 THOC1Q96FV9 657 aaKnown RBP16.47■□□□□ 0.23
TMEM53-201ENST00000372235 OR2M2Q96R28 347 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 FBXL3Q9UKT7 428 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 USP22Q9UPT9 525 aa16.47■□□□□ 0.23
TMEM53-201ENST00000372235 CADP27708 2225 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 B9A039 149 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 INAFM1C9JVW0 142 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 MS4A18H0YCH9 400 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 TRAF3IP2O43734 574 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-201ENST00000372235 CD5LO43866 347 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 F12P00748 615 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-201ENST00000372235 IGLV1-44P01699 117 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 BGLAPP02818 100 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 ERCC1P07992 297 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-201ENST00000372235 SERPINF1P36955 418 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 ARF1P84077 181 aaKnown RBP16.46■□□□□ 0.23
TMEM53-201ENST00000372235 NAAAQ02083 359 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 POU3F1Q03052 451 aaPredicted RBP16.46■□□□□ 0.23
TMEM53-201ENST00000372235 DUSP7Q16829 419 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 CEACAM16Q2WEN9 425 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 MS4A18Q3C1V0 323 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 ERICH5Q6P6B1 374 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 LINC00114Q6XXX2 140 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 RETREG3Q86VR2 466 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 C20orf196Q8IYI0 205 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 NUP37Q8NFH4 326 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 OR8J3Q8NGG0 315 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 OR5J2Q8NH18 312 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 OR10A6Q8NH74 314 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 FAM168AQ92567 244 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 PROX1Q92786 737 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 ECSITQ9BQ95 431 aa16.46■□□□□ 0.23
TMEM53-201ENST00000372235 POLR2J2Q9GZM3 115 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms