RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SRA1Q9HD15 236 aaKnown RBP6.38□□□□□ -1.39
USP1-202ENST00000371146 PCDHB16Q9NRJ7 776 aa6.38□□□□□ -1.39
USP1-202ENST00000371146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.38□□□□□ -1.39
USP1-202ENST00000371146 ING3Q9NXR8 418 aa6.38□□□□□ -1.39
USP1-202ENST00000371146 C19orf53Q9UNZ5 99 aaPredicted RBP6.38□□□□□ -1.39
USP1-202ENST00000371146 J3KTA2 159 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CXCR6O00574 342 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 OIP5O43482 229 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 DOK2O60496 412 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 RAD51DO75771 328 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 UGT2B17O75795 530 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 APOL3O95236 402 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GPX3P22352 226 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 MLC1Q15049 377 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 KIAA0040Q15053 153 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 DPY19L1Q2PZI1 675 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GGTA1PQ4G0N0 100 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 DMRTC1Q5HYR2 192 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 RNFT1Q5M7Z0 435 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 C16orf89Q6UX73 402 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CARM1Q86X55 608 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 LACC1Q8IV20 430 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 NR4A3Q92570 626 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 ZNF566Q969W8 418 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 C12orf43Q96C57 262 aaKnown RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 BHLHE41Q9C0J9 482 aaPredicted RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 NT5DC2Q9H857 520 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CENPMQ9NSP4 180 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 DDX28Q9NUL7 540 aaKnown RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 DNAJC27Q9NZQ0 273 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 COPS3Q9UNS2 423 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 SAMHD1Q9Y3Z3 626 aaKnown RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 AP4S1Q9Y587 144 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 WNK1Q9H4A3 2382 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 PNMA8CA0A1B0GUJ8 204 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 OR2M5A3KFT3 312 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 LINC00862A6NCI5 91 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CTDSP2O14595 271 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 IFNW1P05000 195 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 QDPRP09417 244 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CLEC2LP0C7M8 214 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 DHRS4L1P0CG22 281 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CT45A8P0DMV1 189 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CT45A9P0DMV2 189 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 FUT1P19526 365 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GSK3BP49841 420 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 AQP4P55087 323 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 MELKQ14680 651 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 KRTCAP3Q53RY4 240 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CT45A2Q5DJT8 189 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 BLOC1S3Q6QNY0 202 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 NPSR1Q6W5P4 371 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 FUNDC1Q8IVP5 155 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 LRRC18Q8N456 261 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 OR56B2PQ8NGI1 322 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 OR6K6Q8NGW6 343 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 RND1Q92730 232 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GTF2H4Q92759 462 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 IMMP1LQ96LU5 166 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 SPAG4Q9NPE6 437 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 NUDT15Q9NV35 164 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CNIH4Q9P003 139 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CRYBG3Q68DQ2 2970 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 SERINC4A6NH21 518 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 SNNO75324 88 aaPredicted RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 SEMA7AO75326 666 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 RAB40ALP0C0E4 278 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 BMP2P12643 396 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 ZNF43P17038 809 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GRPRP30550 384 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 PRSS12P56730 875 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 TEKQ02763 1124 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 POU3F1Q03052 451 aaPredicted RBP6.37□□□□□ -1.39
USP1-202ENST00000371146 APOOLQ6UXV4 268 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 CYP4Z1Q86W10 505 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 ABHD3Q8WU67 409 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 TMEM234Q8WY98 164 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 PSMF1Q92530 271 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 LRFN5Q96NI6 719 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 UCN2Q96RP3 112 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 AMBNQ9NP70 447 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 KCNJ16Q9NPI9 418 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GSN-AS1Q9NRJ2 163 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 ZIM2Q9NZV7 527 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 GLS2Q9UI32 602 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 DUSP13Q9UII6 198 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 ZNF221Q9UK13 617 aa6.37□□□□□ -1.39
USP1-202ENST00000371146 A0A087WV48 116 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CENPXA8MT69 81 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 J3QRK9 145 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 SOCS2O14508 198 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ARHGEF9O43307 516 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CCNB2O95067 398 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 CLUP10909 449 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 MST1P26927 711 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 DCKP27707 260 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ALKBH6Q3KRA9 238 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 ADPRMQ3LIE5 342 aa6.36□□□□□ -1.39
USP1-202ENST00000371146 Q71RC1 249 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms