RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CDONQ4KMG0 1287 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 PYDC2Q56P42 97 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 SLC25A30Q5SVS4 291 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 GCNT6Q5T4J0 391 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 RIPPLY2Q5TAB7 128 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 ZNF585AQ6P3V2 769 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 TMEM81Q6P7N7 255 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 ZNF551Q7Z340 670 aaPredicted RBP13.49□□□□□ -0.25
LMO4-201ENST00000370542 C10orf111Q8N326 155 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 LINC00471Q8N535 108 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 NANOGP1Q8N7R0 232 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 CLHC1Q8NHS4 586 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 NEIL3Q8TAT5 605 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 CREB3L1Q96BA8 519 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 DIRAS2Q96HU8 199 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 EGLN2Q96KS0 407 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 KCTD7Q96MP8 289 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 MDFIQ99750 246 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 UBQLN3Q9H347 655 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 PLSCR3Q9NRY6 295 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 FARSBQ9NSD9 589 aaKnown RBP13.49□□□□□ -0.25
LMO4-201ENST00000370542 TEX10Q9NXF1 929 aaPredicted RBP13.49□□□□□ -0.25
LMO4-201ENST00000370542 EIF3KQ9UBQ5 218 aaKnown RBP13.49□□□□□ -0.25
LMO4-201ENST00000370542 Q9UFV3 132 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 MAP1AP78559 2803 aaPredicted RBP13.48□□□□□ -0.25
LMO4-201ENST00000370542 C2orf92A0A1B0GVN3 265 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 FAM90A27PA6NNH2 459 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
LMO4-201ENST00000370542 AP3D1O14617 1153 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 CT62P0C5K7 136 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 SSTR4P31391 388 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 SOX18P35713 384 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 LIMS1P48059 325 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 WNT3P56703 355 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 CD83Q01151 205 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 MGAT2Q10469 447 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
LMO4-201ENST00000370542 RGNQ15493 299 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 KLHL22Q53GT1 634 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 C1orf185Q5T7R7 199 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 PRAMEF20Q5VT98 475 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 FNDC7Q5VTL7 733 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 SAXO2Q658L1 398 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 SEM1Q6ZVN7 128 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 ANKRD46Q86W74 232 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 GOT1L1Q8NHS2 421 aaPredicted RBP13.48□□□□□ -0.25
LMO4-201ENST00000370542 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 DOK4Q8TEW6 326 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 AKAP1Q92667 903 aaKnown RBP eCLIP13.48□□□□□ -0.25
LMO4-201ENST00000370542 RADILQ96JH8 1075 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 FYTTD1Q96QD9 318 aaKnown RBP13.48□□□□□ -0.25
LMO4-201ENST00000370542 OR5M11Q96RB7 305 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 MARVELD1Q9BSK0 173 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 ANGPTL4Q9BY76 406 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 BHLHE41Q9C0J9 482 aaPredicted RBP13.48□□□□□ -0.25
LMO4-201ENST00000370542 PIGUQ9H490 435 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 RNF167Q9H6Y7 350 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 BRF2Q9HAW0 419 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 SNTG1Q9NSN8 517 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 AHSPQ9NZD4 102 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 ACAD8Q9UKU7 415 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 TMCC3Q9ULS5 477 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 ENPP4Q9Y6X5 453 aa13.48□□□□□ -0.25
LMO4-201ENST00000370542 EXPH5Q8NEV8 1989 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
LMO4-201ENST00000370542 TPST2O60704 377 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 GADD45GO95257 159 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 CPSF4O95639 269 aaKnown RBP13.47□□□□□ -0.25
LMO4-201ENST00000370542 GBAP04062 536 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 HPNP05981 417 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 KLK1P06870 262 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 OSMP13725 252 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 CPEP16870 476 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 DDX5P17844 614 aaKnown RBP13.47□□□□□ -0.25
LMO4-201ENST00000370542 C4BPBP20851 252 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 KIR2DL3P43628 341 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 GSTM5P46439 218 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 INPP1P49441 399 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 XKP51811 444 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 NUDT6P53370 316 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 MAPK12P53778 367 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 CDH12P55289 794 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 DLX5P56178 289 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 MAP4K2Q12851 820 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 TATDN3Q17R31 274 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 EXOC3L2Q2M3D2 409 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 SLC25A35Q3KQZ1 300 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 KLHL12Q53G59 568 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 ZNF628Q5EBL2 1059 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 CPTPQ5TA50 214 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 CASP12Q6UXS9 341 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 LAX1Q8IWV1 398 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 OR4K14Q8NGD5 310 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 OR8J1Q8NGP2 316 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 OR10Q1Q8NGQ4 319 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 LRRC20Q8TCA0 184 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 ACOT12Q8WYK0 555 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms