RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 A8MVM7 634 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 VSTM5A8MXK1 200 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 ARAFP10398 606 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 PNMTP11086 282 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 ZNF35P13682 527 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
SSR4-204ENST00000370087 CAPZA2P47755 286 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 EVX1P49640 407 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 EMX2Q04743 252 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 COX20Q5RI15 118 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 ZNF836Q6ZNA1 936 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 VRK2Q86Y07 508 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 WDFY1Q8IWB7 410 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 PPP1R36Q96LQ0 422 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 SUCNR1Q9BXA5 334 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
SSR4-204ENST00000370087 NOP53Q9NZM5 478 aaKnown RBP13.18□□□□□ -0.3
SSR4-204ENST00000370087 PRSS51A0A1B0GVH4 220 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 CDHR4A6H8M9 788 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 PLPP2O43688 288 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
SSR4-204ENST00000370087 VAMP5O95183 116 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 ZNF14P17017 642 aaPredicted RBP13.17□□□□□ -0.3
SSR4-204ENST00000370087 MAGEB1P43366 347 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 CASP8Q14790 479 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 FXNQ16595 210 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 GSTA3Q16772 222 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 ALKBH6Q3KRA9 238 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 SPANXN4Q5MJ08 99 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 BEND6Q5SZJ8 279 aaPredicted RBP13.17□□□□□ -0.3
SSR4-204ENST00000370087 CEP85LQ5SZL2 805 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 SHISA2Q6UWI4 295 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 LRRC74BQ6ZQY2 392 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 TMEM123Q8N131 208 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 APOPT1Q96IL0 206 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 OR2M2Q96R28 347 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 CENPHQ9H3R5 247 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 ZNF224Q9NZL3 707 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 RCE1Q9Y256 329 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 CHST2Q9Y4C5 530 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 PPIAL4AQ9Y536 164 aa13.17□□□□□ -0.3
SSR4-204ENST00000370087 SLC43A1O75387 559 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 MPZL1O95297 269 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 FSHBP01225 129 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 GSNP06396 782 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 DBIP07108 87 aaKnown RBP13.16□□□□□ -0.3
SSR4-204ENST00000370087 HKR1P10072 659 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 UQCRBP14927 111 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 IL7RP16871 459 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 CDKN2CP42773 168 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 TMEM33P57088 247 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 MYBPC1Q00872 1141 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 EGR4Q05215 589 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 PIGFQ07326 219 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 CHI3L2Q15782 390 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 MIDNQ504T8 468 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 ZNF311Q5JNZ3 666 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 WBP2NLQ6ICG8 309 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 TREML4Q6UXN2 200 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 GPR137CQ8N3F9 429 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 ANKK1Q8NFD2 765 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 PNPT1Q8TCS8 783 aaKnown RBP13.16□□□□□ -0.3
SSR4-204ENST00000370087 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR4-204ENST00000370087 SLC25A36Q96CQ1 311 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 ZIM3Q96PE6 472 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 DPY30Q9C005 99 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 MS4A5Q9H3V2 200 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 MKS1Q9NXB0 559 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 OPN4Q9UHM6 478 aa13.16□□□□□ -0.3
SSR4-204ENST00000370087 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
SSR4-204ENST00000370087 M0R3G1 203 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 CDC14BO60729 498 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 CD79AP11912 226 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 GLRXP35754 106 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 RPS5P46782 204 aaKnown RBP13.15□□□□□ -0.3
SSR4-204ENST00000370087 MVKQ03426 396 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
SSR4-204ENST00000370087 ATG16L1Q676U5 607 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 CLIP4Q8N3C7 705 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 BPIFB2Q8N4F0 458 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 IL17RDQ8NFM7 739 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 KTI12Q96EK9 354 aaPredicted RBP13.15□□□□□ -0.3
SSR4-204ENST00000370087 DUX5Q96PT3 197 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 TSPAN32Q96QS1 320 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 AKTIPQ9H8T0 292 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 MTHFD2LQ9H903 347 aaPredicted RBP13.15□□□□□ -0.3
SSR4-204ENST00000370087 CORINQ9Y5Q5 1042 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 WNK2Q9Y3S1 2297 aa13.15□□□□□ -0.3
SSR4-204ENST00000370087 DSPPQ9NZW4 1301 aa13.14□□□□□ -0.31
SSR4-204ENST00000370087 TRAF3IP2O43734 574 aaPredicted RBP13.14□□□□□ -0.31
SSR4-204ENST00000370087 FZD7O75084 574 aa13.14□□□□□ -0.31
SSR4-204ENST00000370087 SPAG7O75391 227 aa13.14□□□□□ -0.31
SSR4-204ENST00000370087 PRSS23O95084 383 aa13.14□□□□□ -0.31
SSR4-204ENST00000370087 AHSA1O95433 338 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms