RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 DRD5P21918 477 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 MAP3K8P41279 467 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 FGF8P55075 233 aaPredicted RBP2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 PLD1Q13393 1074 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 VGLL4Q14135 290 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 NANOGP8Q6NSW7 305 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 AFTPHQ6ULP2 937 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 LYPD2Q6UXB3 125 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 HMGN2P46Q86SG4 172 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 ACOT4Q8N9L9 421 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR4D5Q8NGN0 318 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR2G3Q8NGZ4 309 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR5W2Q8NH69 310 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 GPA33Q99795 319 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 IL26Q9NPH9 171 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 PCSK1NQ9UHG2 260 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 MMP17Q9ULZ9 603 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 NFASCO94856 1347 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 A8MUI8 341 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 ATP5LO75964 103 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 AP2A1O95782 977 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 ATP6V1C1P21283 382 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 NPY1RP25929 384 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 CASP4P49662 377 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 DUSP7Q16829 419 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 CHRFAM7AQ494W8 412 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 DMRTC1Q5HYR2 192 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 BEND3Q5T5X7 828 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 GET4Q7L5D6 327 aaPredicted RBP2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 TMEM123Q8N131 208 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 SYNPRQ8TBG9 265 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 RMI2Q96E14 147 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 OMDQ99983 421 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 PALMDQ9NP74 551 aa2.3□□□□□ -2.04
RNU4-28P-201ENST00000364739 RGSL1A5PLK6 1076 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 MFN2O95140 757 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 RGS4P49798 205 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 ZNF679Q8IYX0 411 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 IPMKQ8NFU5 416 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR1N2Q8NGR9 330 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 CCDC110Q8TBZ0 833 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 MAIP1Q8WWC4 291 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 UFD1Q92890 307 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 EFHD2Q96C19 240 aaPredicted RBP2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 LINC00477Q96M19 166 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 TUBGCP2Q9BSJ2 902 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 RAB34Q9BZG1 259 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 NOX3Q9HBY0 568 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 CALYQ9NYX4 217 aa2.29□□□□□ -2.04
RNU4-28P-201ENST00000364739 MN1Q10571 1320 aaPredicted RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 F5H6K3 240 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 PRRG1O14668 218 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 IFNB1P01574 187 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 CSF3P09919 207 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 GKN3PP0CG01 181 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 CMA1P23946 247 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 LAP3P28838 519 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 MDH1P40925 334 aaKnown RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 KLRC3Q07444 240 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 ASPHQ12797 758 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 UBE2SQ16763 222 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 TATDN3Q17R31 274 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 VAX1Q5SQQ9 334 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 C19orf35Q6ZS72 473 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 NCCRP1Q6ZVX7 275 aaPredicted RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 CCDC80Q76M96 950 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 EXOSC8Q96B26 276 aaKnown RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 AURKBQ96GD4 344 aaPredicted RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 THUMPD2Q9BTF0 503 aaKnown RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 CTPS2Q9NRF8 586 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 GLRX2Q9NS18 164 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 TAS2R3Q9NYW6 316 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 SPATA7Q9P0W8 599 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 MARCOQ9UEW3 520 aaPredicted RBP2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR12D3Q9UGF7 316 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 TIMM10BQ9Y5J6 103 aa2.28□□□□□ -2.04
RNU4-28P-201ENST00000364739 PLA2R1Q13018 1463 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CARMIL3Q8ND23 1372 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 IGLV3-22A0A075B6J6 115 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 A0A1W2PP18 115 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CIB4A0PJX0 185 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 A8MXQ7 604 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 HSD17B6O14756 317 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 BET1O15155 118 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 DIRAS1O95057 198 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 DCNP07585 359 aaKnown RBP2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 ADRA2AP08913 450 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 PRPS2P11908 318 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 KRT13P13646 458 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CCDC130P13994 396 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CELP19835 753 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 GDI1P31150 447 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 QARSP47897 775 aaKnown RBP2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 ZBED5Q49AG3 693 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 C1orf220Q5T0J3 134 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CNIH2Q6PI25 160 aa2.27□□□□□ -2.05
RNU4-28P-201ENST00000364739 CES3Q6UWW8 571 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms