RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TPGS2Q68CL5 300 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 GDF7Q7Z4P5 450 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 LMF1Q96S06 567 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SYNDIG1Q9H7V2 258 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 HS3ST2Q9Y278 367 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 PCYT1BQ9Y5K3 369 aaPredicted RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SPAG17Q6Q759 2223 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 IGLV3-16A0A075B6K0 115 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 NPIPB8E9PQR5 432 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 CD3DP04234 171 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 CD2P06729 351 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 MGMTP16455 207 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 CCR2P41597 374 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 NR0B1P51843 470 aaKnown RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 TAS2R20P59543 309 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 POU4F2Q12837 409 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 PDE7AQ13946 482 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 TSC22D1Q15714 1073 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF425Q6IV72 752 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 OR6K3Q8NGY3 331 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SUN3Q8TAQ9 357 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 C20orf141Q9NUB4 165 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 EXOGQ9Y2C4 368 aaKnown RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 A0A1B0GV90 55 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SLC22A31A6NKX4 558 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 OR2A4O95047 310 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 CSNK2A2P19784 350 aaPredicted RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 S100PP25815 95 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SDHAP31040 664 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 VIPR2P41587 438 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 PDZD11Q5EBL8 140 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 OR4C11Q6IEV9 310 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 MRM1Q6IN84 353 aaKnown RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 THSD4Q6ZMP0 1018 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SLC29A4Q7RTT9 530 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF761Q86XN6 746 aaPredicted RBP11.67□□□□□ -0.54
VAMP1-201ENST00000361716 KLHDC8AQ8IYD2 350 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 RAB42Q8N4Z0 105 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 AMDHD1Q96NU7 426 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 OR2A7Q96R45 310 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF350Q9GZX5 532 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 SPHK2Q9NRA0 654 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 IKZF2Q9UKS7 526 aa11.67□□□□□ -0.54
VAMP1-201ENST00000361716 PQLC2LA1A4F0 135 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 PLPP2O43688 288 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 AMY2AP04746 511 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 RPN2P04844 631 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 NME1P15531 152 aaKnown RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 ADCYAP1P18509 176 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 TAS2R43P59537 309 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 EFNB1P98172 346 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 MESP2Q0VG99 397 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 PLA2G7Q13093 441 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 FZD5Q13467 585 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 IRF5Q13568 498 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 FAM76BQ5HYJ3 339 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 FIP1L1Q6UN15 594 aaKnown RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 CD163Q86VB7 1156 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 CDS1Q92903 461 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 LYSMD1Q96S90 227 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF649Q9BS31 505 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 NRIP3Q9NQ35 241 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 SIRT3Q9NTG7 399 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 V9GY05 133 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 GXYLT2A0PJZ3 443 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 IFITM5A6NNB3 132 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 NPC1O15118 1278 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 ACTL6AO96019 429 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 KLK3P07288 261 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 DCNP07585 359 aaKnown RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 CPN1P15169 458 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 CSF2RAP15509 400 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 NT5EP21589 574 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 ADH6P28332 368 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 MPGP29372 298 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 MNDAP41218 407 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 PRKXP51817 358 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 PDX1P52945 283 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 DEFB103AP81534 67 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 FOXK2Q01167 660 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 SKP2Q13309 424 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 USF2Q15853 346 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 DEFB134Q4QY38 66 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 STPG1Q5TH74 334 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 GLB1L2Q8IW92 636 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 SAMD14Q8IZD0 417 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 IL20Q9NYY1 176 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 ZNF337Q9Y3M9 751 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 FOXE1O00358 373 aaPredicted RBP11.66□□□□□ -0.54
VAMP1-201ENST00000361716 SLC31A1O15431 190 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 AQP8O94778 261 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 CD63P08962 238 aa11.66□□□□□ -0.54
VAMP1-201ENST00000361716 PSMA3P25788 255 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms