RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IL17RDQ8NFM7 739 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 TMEM19Q96HH6 336 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 PLA2G12AQ9BZM1 189 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 ARMC7Q9H6L4 198 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 CMAHPQ9Y471 501 aa18.21■□□□□ 0.51
CD47-202ENST00000361309 VENTXO95231 258 aa18.2■□□□□ 0.5
CD47-202ENST00000361309 PCMT1P22061 227 aa18.2■□□□□ 0.5
CD47-202ENST00000361309 STX3Q13277 289 aa18.2■□□□□ 0.5
CD47-202ENST00000361309 C1DQ13901 141 aaKnown RBP18.2■□□□□ 0.5
CD47-202ENST00000361309 MSMPQ1L6U9 139 aa18.2■□□□□ 0.5
CD47-202ENST00000361309 MRPL37Q9BZE1 423 aaKnown RBP18.2■□□□□ 0.5
CD47-202ENST00000361309 USP22Q9UPT9 525 aa18.2■□□□□ 0.5
CD47-202ENST00000361309 A0A0G2JPF8 293 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 ZNF99A8MXY4 864 aaPredicted RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 HNRNPCL2B2RXH8 293 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 B4DSR2 109 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 HNRNPCL3B7ZW38 293 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 M0R082 166 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 HNRNPCL1O60812 293 aaKnown RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 HNRNPCL4P0DMR1 293 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 NR4A1P22736 598 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 POU3F1Q03052 451 aaPredicted RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 PHYHD1Q5SRE7 291 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 GLCCI1Q86VQ1 547 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 CCDC36Q8IYA8 594 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 GLB1L3Q8NCI6 653 aaPredicted RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 PIK3C3Q8NEB9 887 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 ZNF417Q8TAU3 575 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 MRPL24Q96A35 216 aaKnown RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 OR2M2Q96R28 347 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 ZNF587Q96SQ5 575 aaPredicted RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 TMEM109Q9BVC6 243 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 METTL17Q9H7H0 456 aaPredicted RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 TPT1P8Q9HAU6 139 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 CACYBPQ9HB71 228 aaKnown RBP18.19■□□□□ 0.5
CD47-202ENST00000361309 IFT52Q9Y366 437 aa18.19■□□□□ 0.5
CD47-202ENST00000361309 WNK2Q9Y3S1 2297 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 AIM2O14862 343 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 TM9SF1O15321 606 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 SYNGR3O43761 229 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 FZD7O75084 574 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 ANP32DO95626 131 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 IL6P05231 212 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 EPHA3P29320 983 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 KRT71Q3SY84 523 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 GTDC1Q4AE62 458 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 ZNF311Q5JNZ3 666 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 ELFN2Q5R3F8 820 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 TMEM123Q8N131 208 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 AENQ8WTP8 325 aaKnown RBP18.18■□□□□ 0.5
CD47-202ENST00000361309 TAAR8Q969N4 342 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 MS4A3Q96HJ5 214 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 NARFLQ9H6Q4 476 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 WDR55Q9H6Y2 383 aaPredicted RBP18.18■□□□□ 0.5
CD47-202ENST00000361309 SSU72Q9NP77 194 aaKnown RBP18.18■□□□□ 0.5
CD47-202ENST00000361309 B3GNT2Q9NY97 397 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 REV1Q9UBZ9 1251 aa18.18■□□□□ 0.5
CD47-202ENST00000361309 A0A0A6YYJ9 748 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 SLCO1B7G3V0H7 640 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 M0R3G1 203 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 HLA-HP01893 362 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 ZCCHC18P0CG32 403 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 CD79AP11912 226 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 TCN1P20061 433 aaPredicted RBP18.17■□□□□ 0.5
CD47-202ENST00000361309 CBLP22681 906 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 EVX1P49640 407 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 BST1Q10588 318 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 CARD17Q5XLA6 110 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 DEF8Q6ZN54 512 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 H1FNTQ75WM6 255 aaPredicted RBP18.17■□□□□ 0.5
CD47-202ENST00000361309 CARM1Q86X55 608 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 SEMA6DQ8NFY4 1073 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 CLDND2Q8NHS1 167 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 RPS6KB2Q9UBS0 482 aa18.17■□□□□ 0.5
CD47-202ENST00000361309 TMEM247A6NEH6 219 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 FAM157AC9JC47 383 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 M0R233 179 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 RGS16O15492 202 aaPredicted RBP18.16■□□□□ 0.5
CD47-202ENST00000361309 TRAF3IP2O43734 574 aaPredicted RBP18.16■□□□□ 0.5
CD47-202ENST00000361309 AKAP8O43823 692 aaKnown RBP18.16■□□□□ 0.5
CD47-202ENST00000361309 OR2T1O43869 369 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 SLC22A3O75751 556 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 HPXP02790 462 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 COL8A2P25067 703 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 GRPRP30550 384 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 GPR6P46095 362 aaPredicted RBP18.16■□□□□ 0.5
CD47-202ENST00000361309 PIGFQ07326 219 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 MPP2Q14168 576 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 FAM69AQ5T7M9 428 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 C6orf89Q6UWU4 347 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 ZFAND2BQ8WV99 257 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 SLC38A4Q969I6 547 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 VPS33AQ96AX1 596 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 TMEM186Q96B77 213 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 SYT3Q9BQG1 590 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 MS4A5Q9H3V2 200 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 LPAR2Q9HBW0 351 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 HIF1ANQ9NWT6 349 aa18.16■□□□□ 0.5
CD47-202ENST00000361309 THUMPD1Q9NXG2 353 aaKnown RBP18.16■□□□□ 0.5
CD47-202ENST00000361309 LOC102725191A0A1B0GVB3 256 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms