RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TSPAN2O60636 221 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 ZNF780AO75290 641 aaPredicted RBP20.56■□□□□ 0.88
LDB1-201ENST00000361198 SERPINI2O75830 405 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 IGF2P01344 180 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 TACR3P29371 465 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 ACVR1BP36896 505 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 GGTLC2Q14390 218 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 PON3Q15166 354 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 YOD1Q5VVQ6 348 aaPredicted RBP20.56■□□□□ 0.88
LDB1-201ENST00000361198 MARCH3Q86UD3 253 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 LIPHQ8WWY8 451 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 GFM1Q96RP9 751 aaKnown RBP20.56■□□□□ 0.88
LDB1-201ENST00000361198 ABCG5Q9H222 651 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 C4orf47A7E2U8 309 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 SPI1P17947 270 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 BTCP35070 178 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 PLCXD2Q0VAA5 305 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 TP53I3Q53FA7 332 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 ACSM3Q53FZ2 586 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 LYSMD4Q5XG99 296 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 TMEM71Q6P5X7 295 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 COX15Q7KZN9 410 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 POMGNT2Q8NAT1 580 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 KTI12Q96EK9 354 aaPredicted RBP20.56■□□□□ 0.88
LDB1-201ENST00000361198 Q96M85 177 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 NMNAT2Q9BZQ4 307 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 ALPK2Q86TB3 2170 aa20.56■□□□□ 0.88
LDB1-201ENST00000361198 TEX13CA0A0J9YWL9 993 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 TO15178 435 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 CPNE3O75131 537 aaKnown RBP20.55■□□□□ 0.88
LDB1-201ENST00000361198 OR2T7P0C7T2 308 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 DIO1P49895 249 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 TOMM34Q15785 309 aaPredicted RBP20.55■□□□□ 0.88
LDB1-201ENST00000361198 ISXQ2M1V0 245 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ASB18Q6ZVZ8 466 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 SLC29A4Q7RTT9 530 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 OR2T27Q8NH04 317 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 TRMT10AQ8TBZ6 339 aaKnown RBP20.55■□□□□ 0.88
LDB1-201ENST00000361198 GHSRQ92847 366 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 OMA1Q96E52 524 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ADAM19Q9H013 955 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 CCDC86Q9H6F5 360 aaKnown RBP20.55■□□□□ 0.88
LDB1-201ENST00000361198 PRDM6Q9NQX0 595 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ST6GALNAC2Q9UJ37 374 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 TRAV1-2A0A0B4J238 106 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 CPED1A4D0V7 1026 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ARHGEF9O43307 516 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 FZD7O75084 574 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ASAH2BP0C7U1 165 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ABCD3P28288 659 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 EPHA8P29322 1005 aaPredicted RBP20.55■□□□□ 0.88
LDB1-201ENST00000361198 EVI2BP34910 448 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 LAMTOR1Q6IAA8 161 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 GUSBP11Q6P575 273 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 LYPD4Q6UWN0 246 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 SLC35F2Q8IXU6 374 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 LRRC75AQ8NAA5 344 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 SLC38A9Q8NBW4 561 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 C7orf57Q8NEG2 295 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 ZCCHC4Q9H5U6 513 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 FSCN3Q9NQT6 498 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 CACNG2Q9Y698 323 aa20.55■□□□□ 0.88
LDB1-201ENST00000361198 MUC3AQ02505 3323 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 IGHV3-20A0A0C4DH32 117 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 A0A1W2PPC1 479 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 NDUFB5O43674 189 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 CDKN2AP42771 156 aaKnown RBP20.54■□□□□ 0.88
LDB1-201ENST00000361198 LGALS3BPQ08380 585 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 SLC25A35Q3KQZ1 300 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 RHBDD2Q6NTF9 364 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 FAM122BQ7Z309 247 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 PLPP5Q8NEB5 264 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 OR6K6Q8NGW6 343 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 SLC7A5P2Q9GIP4 190 aa20.54■□□□□ 0.88
LDB1-201ENST00000361198 C7orf66A4D0T2 115 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 ALG1L2C9J202 215 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 OGG1O15527 345 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 SELENOFO60613 162 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 RAB3BP20337 219 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 LCN1P31025 176 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 SLC36A2Q495M3 483 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 ALG10Q5BKT4 473 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 LEG1Q6P5S2 330 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 KANSL1Q7Z3B3 1105 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 ZNF441Q8N8Z8 693 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 STT3BQ8TCJ2 826 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 DEDD2Q8WXF8 326 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 LPAR4Q99677 370 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 MESP1Q9BRJ9 268 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 MFRPQ9BY79 579 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 COPS3Q9UNS2 423 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 EEF1E1O43324 174 aaKnown RBP20.53■□□□□ 0.88
LDB1-201ENST00000361198 F13BP05160 661 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 CD14P08571 375 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 ITPKBP27987 946 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 SLC6A8P48029 635 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 GNG2P59768 71 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 CTXN1P60606 82 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 PELI1Q96FA3 418 aa20.53■□□□□ 0.88
LDB1-201ENST00000361198 A0A0A6YYJ9 748 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms