RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 ANKRD9Q96BM1 317 aaPredicted RBP11.34□□□□□ -0.59
UBA3-202ENST00000361055 DDOQ99489 341 aa11.34□□□□□ -0.59
UBA3-202ENST00000361055 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
UBA3-202ENST00000361055 LRIT1Q9P2V4 623 aa11.34□□□□□ -0.59
UBA3-202ENST00000361055 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
UBA3-202ENST00000361055 TMA7Q9Y2S6 64 aaKnown RBP11.34□□□□□ -0.59
UBA3-202ENST00000361055 MRPS2Q9Y399 296 aaKnown RBP11.34□□□□□ -0.59
UBA3-202ENST00000361055 IER3IP1Q9Y5U9 82 aa11.34□□□□□ -0.59
UBA3-202ENST00000361055 GOLGA4Q13439 2230 aaKnown RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 TEX51A0A1B0GUA7 166 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 ZNF860A6NHJ4 632 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 C2orf74A8MZ97 194 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 ZNF593O00488 134 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 GALR3O60755 368 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 PEX14O75381 377 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 CBX7O95931 251 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 TGM6O95932 706 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 IFNA7P01567 189 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 MT-ND4P03905 459 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 DNASE1P24855 282 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 EDNRAP25101 427 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 GDNFP39905 211 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 CCR9P51686 369 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 EPHA4P54764 986 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 CRYZQ08257 329 aaKnown RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 CA13Q8N1Q1 262 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 RFLNBQ8N5W9 214 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 OR10G6Q8NH81 332 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 RPS4Y2Q8TD47 263 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 NXPE2Q96DL1 559 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 PTCHD1Q96NR3 888 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 DHRS9Q9BPW9 319 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 LMF2Q9BU23 707 aaKnown RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 MRI1Q9BV20 369 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 HRASLS2Q9NWW9 162 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 GLTPQ9NZD2 209 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 SCN3AQ9NY46 2000 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 LNP1A1A4G5 178 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 SYNDIG1LA6NDD5 238 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 OR5K3A6NET4 321 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 ARPC3O15145 178 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 MAGEB4O15481 346 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 PPM1BO75688 479 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 SNAPC5O75971 98 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 PSMB1P20618 241 aaKnown RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 EMDP50402 254 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 AP3S2P59780 193 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 ZNF141Q15928 474 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 ELFN2Q5R3F8 820 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 GPR139Q6DWJ6 353 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 SEZ6L2Q6UXD5 910 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 PRSS41Q7RTY9 318 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 NPEPL1Q8NDH3 523 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 SDR9C7Q8NEX9 313 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 OR6C4Q8NGE1 309 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 SGTBQ96EQ0 304 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 OR14A2Q96R54 314 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
UBA3-202ENST00000361055 GNG8Q9UK08 70 aa11.33□□□□□ -0.6
UBA3-202ENST00000361055 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 GABARAPH6UMI1 98 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 SIGLEC6O43699 453 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 SSNA1O43805 119 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 ADAM11O75078 769 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 PDGFAP04085 211 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 S1PR1P21453 382 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 GPR3P46089 330 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 GPR143P51810 404 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 PSG6Q00889 435 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 IL10RAQ13651 578 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 NR0B2Q15466 257 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 GRK1Q15835 563 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 RNASE12Q5GAN4 147 aaKnown RBP11.32□□□□□ -0.6
UBA3-202ENST00000361055 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 ARMC6Q6NXE6 501 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 FAM199XQ6PEV8 388 aaPredicted RBP11.32□□□□□ -0.6
UBA3-202ENST00000361055 IDO2Q6ZQW0 420 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 ESPNLQ6ZVH7 1005 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 LSRQ86X29 649 aaPredicted RBP11.32□□□□□ -0.6
UBA3-202ENST00000361055 OR52R1Q8NGF1 315 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 OR5T3Q8NGG3 340 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 BAHD1Q8TBE0 780 aaPredicted RBP11.32□□□□□ -0.6
UBA3-202ENST00000361055 LGALS14Q8TCE9 139 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
UBA3-202ENST00000361055 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 NMNAT2Q9BZQ4 307 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
UBA3-202ENST00000361055 HRASLSQ9HDD0 168 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 NOX4Q9NPH5 578 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 ZNF281Q9Y2X9 895 aa11.32□□□□□ -0.6
UBA3-202ENST00000361055 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
UBA3-202ENST00000361055 AIPO00170 330 aa11.31□□□□□ -0.6
UBA3-202ENST00000361055 PIN1P1O15428 100 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms