RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MRPS18BQ9Y676 258 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 LOC101059948A0A1B0GTJ6 334 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 C17orf51A8MQB3 221 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 LYRM1O43325 122 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 RAD1O60671 282 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 LALBAP00709 142 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 PSKH1P11801 424 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 ERP29P30040 261 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 CD79BP40259 229 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 ACAA2P42765 397 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 CCR4P51679 360 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 RNF113BQ8IZP6 322 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 CADM2Q8N3J6 435 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 ACBD7Q8N6N7 88 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 LSMEM1Q8N8F7 131 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 OR52L1Q8NGH7 329 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 MMP25Q9NPA2 562 aa11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 EXOSC3Q9NQT5 275 aaKnown RBP11.97□□□□□ -0.49
SQSTM1-201ENST00000360718 AKAP13Q12802 2813 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 SPTBN2O15020 2390 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 DOCK10Q96BY6 2186 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 A0A1W2PQ72 361 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ALG1L2C9J202 215 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 LRRTM2O43300 516 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ARHGEF9O43307 516 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ORC5O43913 435 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 RGS9O75916 674 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 BMP7P18075 431 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 EVI2BP34910 448 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 MTNR1BP49286 362 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 RAB25P57735 213 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 IL10RAQ13651 578 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 CD226Q15762 336 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF791Q3KP31 576 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 FNDC7Q5VTL7 733 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ULK3Q6PHR2 472 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 UTS2BQ765I0 119 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 KLBQ86Z14 1044 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 LIX1LQ8IVB5 337 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 CPOQ8IVL8 374 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 UBE2J2Q8N2K1 259 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 BRIX1Q8TDN6 353 aaKnown RBP11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 GRHL3Q8TE85 626 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 TMEM255BQ8WV15 326 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 RNF170Q96K19 258 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 SAMD8Q96LT4 415 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 HS6ST2Q96MM7 605 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF649Q9BS31 505 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 NDEL1Q9GZM8 345 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 ING3Q9NXR8 418 aa11.96□□□□□ -0.49
SQSTM1-201ENST00000360718 A0A1B0GWA3 101 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 UNC119BA6NIH7 251 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 OIP5O43482 229 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CHP2O43745 196 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 SLC43A1O75387 559 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CD82P27701 267 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 SLC6A8P48029 635 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CD83Q01151 205 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 TRAM1Q15629 374 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 TATDN3Q17R31 274 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 ALG10BQ5I7T1 473 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 RPL13AP3Q6NVV1 102 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CDK20Q8IZL9 346 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 OR5M3Q8NGP4 307 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 FYTTD1Q96QD9 318 aaKnown RBP11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 KLHDC3Q9BQ90 382 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 GON7Q9BXV9 100 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 LAT2Q9GZY6 243 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 UBQLN3Q9H347 655 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 A0A0B4J2E0 115 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 A0A1B0GX12 115 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CD8B2A6NJW9 211 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 RNF13O43567 381 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 HCRTR2O43614 444 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 EIF4E2O60573 245 aaKnown RBP11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 OR2J2O76002 312 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CD8BP10966 210 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CD53P19397 219 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 TALDO1P37837 337 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CLDN20P56880 219 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 SKP2Q13309 424 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 BICRALQ6AI39 1079 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 MEPCEQ7L2J0 689 aaKnown RBP11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 MARCH3Q86UD3 253 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 IL22RA1Q8N6P7 574 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 ADAMTS14Q8WXS8 1223 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 TTC9Q92623 222 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 HINT3Q9NQE9 182 aaKnown RBP11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 INPP5EQ9NRR6 644 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 MALT1Q9UDY8 824 aa11.95□□□□□ -0.5
SQSTM1-201ENST00000360718 CDRT15L2A8MXV6 281 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ADAM10O14672 748 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms