RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 KLHDC2Q9Y2U9 406 aa11.1□□□□□ -0.63
CLIP3-201ENST00000360535 ZNF281Q9Y2X9 895 aa11.1□□□□□ -0.63
CLIP3-201ENST00000360535 A0A1B0GVI7 797 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 C17orf51A8MQB3 221 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 DCTN6O00399 190 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 GALR3O60755 368 aaPredicted RBP11.09□□□□□ -0.63
CLIP3-201ENST00000360535 PLGP00747 810 aaPredicted RBP11.09□□□□□ -0.63
CLIP3-201ENST00000360535 ST6GAL1P15907 406 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 DIO1P49895 249 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 GUCA2AQ02747 115 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 HTR4Q13639 388 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 NFATC4Q14934 902 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 AANATQ16613 207 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 LRRC69Q6ZNQ3 347 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 FAM220AQ7Z4H9 259 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 FGD2Q7Z6J4 655 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 OR51A4Q8NGJ6 313 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 PCDHGA5Q9Y5G8 931 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 EML5Q05BV3 1969 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 LOC105371267A0A1B0GV96 52 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 A0A1W2PPL8 197 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 LINC01565O15544 149 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 GRK6P43250 576 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 GPR139Q6DWJ6 353 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 OOSP2Q86WS3 158 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
CLIP3-201ENST00000360535 RGP1Q92546 391 aaPredicted RBP11.09□□□□□ -0.63
CLIP3-201ENST00000360535 MOGAT1Q96PD6 335 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
CLIP3-201ENST00000360535 ANKRD10Q9NXR5 420 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 CPNE7Q9UBL6 633 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
CLIP3-201ENST00000360535 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
CLIP3-201ENST00000360535 LGALS8O00214 317 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 KHNYNO15037 678 aaKnown RBP11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ITGA10O75578 1167 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 TSPAN9O75954 239 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 CD53P19397 219 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 P2RX1P51575 399 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 SQSTM1Q13501 440 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 GAS6Q14393 721 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ALG11Q2TAA5 492 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 PCGF3Q3KNV8 242 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 CDONQ4KMG0 1287 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ARMC6Q6NXE6 501 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 Q6ZSR6 202 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 RTL10Q7L3V2 364 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 OVCH1Q7RTY7 1134 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 OR5AK2Q8NH90 309 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 HAVCR2Q8TDQ0 301 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 SLITRK2Q9H156 845 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 RABL2BQ9UNT1 228 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 CDC14CA4D256 554 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 C2orf74A8MZ97 194 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 NUDT14O95848 222 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 KIR2DL1P43626 348 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ART1P52961 327 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 CBLN3Q6UW01 205 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 STAC2Q6ZMT1 411 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 SLC35D2Q76EJ3 337 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 POMGNT2Q8NAT1 580 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 LSM14AQ8ND56 463 aaKnown RBP11.08□□□□□ -0.64
CLIP3-201ENST00000360535 OR5M1Q8NGP8 315 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 OR14A16Q8NHC5 309 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ACTR6Q9GZN1 396 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 Q9N2J8 555 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 HAO2Q9NYQ3 351 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 SCML1Q9UN30 329 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ASXL3Q9C0F0 2248 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 A0A087WV62 115 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 PCP4L1A6NKN8 68 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 B4DGG1 531 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 TGFBR3LH3BV60 316 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 AIPO00170 330 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 NKX2-2O95096 273 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 APBB3O95704 486 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 EGFP01133 1207 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 CSN2P05814 226 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 CBFBQ13951 182 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 MELKQ14680 651 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 FAM198BQ6UWH4 519 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 NPSR1Q6W5P4 371 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 GLB1L2Q8IW92 636 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 PRSS58Q8IYP2 241 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 OR4D10Q8NGI6 311 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 SLC37A2Q8TED4 501 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 NSMAFQ92636 917 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 PPP1R14AQ96A00 147 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-201ENST00000360535 KLHDC3Q9BQ90 382 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
CLIP3-201ENST00000360535 ZMAT3Q9HA38 289 aaKnown RBP11.08□□□□□ -0.64
CLIP3-201ENST00000360535 LYRM4Q9HD34 91 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms