RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 EXOSC3Q9NQT5 275 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 PIP5KL1Q5T9C9 394 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 TOLLIPQ9H0E2 274 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 GORASP2Q9H8Y8 452 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 CLCF1Q9UBD9 225 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 NPIPA5A0A0B4J1W7 369 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF623O75123 536 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 DDAH2O95865 285 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ACP2P11117 423 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 USF1P22415 310 aaPredicted RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 WDR5P61964 334 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 LY6G5CQ5SRR4 150 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SIAH3Q8IW03 269 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 THAP3Q8WTV1 239 aaPredicted RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 GAR1Q9NY12 217 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 OR6C68A6NDL8 312 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 LAMP1P11279 417 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 CCL5P13501 91 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC1A3P43003 542 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 WBP2NLQ6ICG8 309 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 CNEP1R1Q8N9A8 125 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SDR9C7Q8NEX9 313 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 OR4F15Q8NGB8 312 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 OR1S2Q8NGQ3 325 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SFT2D1Q8WV19 159 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC35D1Q9NTN3 355 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 TMEM212A6NML5 194 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SEMA4FO95754 770 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 GATMP50440 423 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF561Q8N587 486 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SPHK2Q9NRA0 654 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SCN1AP35498 2009 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 RPS23P62266 143 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 MEP1BQ16820 701 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 GRAMD2AQ8IUY3 354 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 CLRN3Q8NCR9 226 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ACVR1CQ8NER5 493 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC23A2Q9UGH3 650 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ANXA7P20073 488 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 AGFG1P52594 562 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SEC61A1P61619 476 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 RPL11P62913 178 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 EVX2Q03828 476 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 LRRC26Q2I0M4 334 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SERPINA11Q86U17 422 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 TMEM163Q8TC26 289 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF300Q96RE9 604 aaPredicted RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 SRRQ9GZT4 340 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 NXT1Q9UKK6 140 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 PRAMEF27A3QJZ7 478 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 ZFAND5O76080 213 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 TFAP2AP05549 437 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 HPNP05981 417 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 RAB5AP20339 215 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 PRAMEF9Q5VWM5 478 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SYT13Q7L8C5 426 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 CREB3L4Q8TEY5 395 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SDR39U1Q9NRG7 319 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 GDE1Q9NZC3 331 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 ZFC3H1O60293 1989 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 PHOX2AO14813 284 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 CBX7O95931 251 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SELEP16581 610 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 GPLD1P80108 840 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 KLHDC1Q8N7A1 406 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 M0QZ24 198 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SPINT2O43291 252 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 GALR3O60755 368 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 B3GNT9Q6UX72 402 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 MFSD6LQ8IWD5 586 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 KLHDC8AQ8IYD2 350 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 FYTTD1Q96QD9 318 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF331Q9NQX6 463 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 CTRB1P17538 263 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 EMP3P54852 163 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 LYRM7Q5U5X0 104 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 HBMQ6B0K9 141 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 CTRB2Q6GPI1 263 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 MRPL10Q7Z7H8 261 aaKnown RBP12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 MMP21Q8N119 569 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 WNT6Q9Y6F9 365 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 INCA1Q0VD86 236 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 PMPCAQ10713 525 aa12.31□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC17A1Q14916 467 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms