RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NOX1Q9Y5S8 564 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 GPR171O14626 319 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 TOXO94900 526 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 NDUFB2O95178 105 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 HPRP00739 348 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 F13BP05160 661 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 RPL4P36578 427 aaKnown RBP13.57□□□□□ -0.24
TPM1-206ENST00000358278 SLC16A1P53985 500 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 POU4F3Q15319 338 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 C4orf17Q53FE4 359 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 TMEM201Q5SNT2 666 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 EEF1A1P5Q5VTE0 462 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 SMARCD3Q6STE5 483 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 PXKQ7Z7A4 578 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 TUSC5Q8IXB3 177 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 CNEP1R1Q8N9A8 125 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 ANKK1Q8NFD2 765 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 MOSPD2Q8NHP6 518 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
TPM1-206ENST00000358278 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
TPM1-206ENST00000358278 C9orf16Q9BUW7 83 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 UCK2Q9BZX2 261 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 RNPEPL1Q9HAU8 725 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 MCCC2Q9HCC0 563 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 GP6Q9HCN6 339 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 B3GAT1Q9P2W7 334 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 EMC9Q9Y3B6 208 aa13.57□□□□□ -0.24
TPM1-206ENST00000358278 IGKV3D-15A0A087WSY6 115 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 MGRN1O60291 552 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 SS18L1O75177 396 aaPredicted RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 YES1P07947 543 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 TSPAN19P0C672 248 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 AGTR1P30556 359 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 CEACAM8P31997 349 aaPredicted RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 DAPP51397 102 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 SIRPAP78324 504 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 ZP4Q12836 540 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 COX10Q12887 443 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 FHL1Q13642 323 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 PDK3Q15120 406 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 RPL13AP3Q6NVV1 102 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 MTFR2Q6P444 385 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 FAHD1Q6P587 224 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 ZNF620Q6ZNG0 422 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 NAXEQ8NCW5 288 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 OR52L1Q8NGH7 329 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 OSBPL10Q9BXB5 764 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 OR52D1Q9H346 318 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 SMURF2Q9HAU4 748 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 BCO1Q9HAY6 547 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 PAPOLBQ9NRJ5 636 aaKnown RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 INIPQ9NRY2 104 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 KRT84Q9NSB2 600 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 IL20RAQ9UHF4 553 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 NOSIPQ9Y314 301 aaKnown RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 FLVCR1Q9Y5Y0 555 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 A0A0G2JNJ9 132 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 A0A1W2PRG6 482 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 HSPB2A8KAH6 182 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 ZNF724A8MTY0 619 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 EI24O14681 340 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 SOX14O95416 240 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 HLA-DOBP13765 273 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 IGFBP5P24593 272 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 FOXF2Q12947 444 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 HSPB2Q16082 182 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 ANKRD34AQ69YU3 496 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 CD300LDQ6UXZ3 194 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 RASSF6Q6ZTQ3 369 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 CREB3L2Q70SY1 520 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 FAM214BQ7L5A3 538 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 CBR4Q8N4T8 237 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 CCDC120Q96HB5 630 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 FANCFQ9NPI8 374 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 NKX1-2Q9UD57 310 aaPredicted RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 Q9UFV3 132 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 ING1Q9UK53 422 aaPredicted RBP13.56□□□□□ -0.24
TPM1-206ENST00000358278 CDH10Q9Y6N8 788 aa13.56□□□□□ -0.24
TPM1-206ENST00000358278 MCIDASD6RGH6 385 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 H3BN98 237 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 TRAF3IP2O43734 574 aaPredicted RBP13.55□□□□□ -0.24
TPM1-206ENST00000358278 AKAP8O43823 692 aaKnown RBP13.55□□□□□ -0.24
TPM1-206ENST00000358278 PTP4A3O75365 173 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 CRHP06850 196 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 CTSSP25774 331 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 CLDN17P56750 224 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 CTXN1P60606 82 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 PPP2R2BQ00005 443 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 SLC34A1Q06495 639 aa13.55□□□□□ -0.24
TPM1-206ENST00000358278 TOP3AQ13472 1001 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms