RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 OR4F3Q6IEY1 312 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 ZCCHC23Q6ZST2 131 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 LRP11Q86VZ4 500 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 SIGLECL1Q8N7X8 197 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 PIK3C3Q8NEB9 887 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 VPS37AQ8NEZ2 397 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 DVL3Q92997 716 aaPredicted RBP13.56□□□□□ -0.24
IFT20-202ENST00000357896 GPA33Q99795 319 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 DENND2DQ9H6A0 471 aaPredicted RBP13.56□□□□□ -0.24
IFT20-202ENST00000357896 PYCARDQ9ULZ3 195 aa13.56□□□□□ -0.24
IFT20-202ENST00000357896 COPEO14579 308 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 FRS3O43559 492 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 CDC14BO60729 498 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 FSHBP01225 129 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 DBIP07108 87 aaKnown RBP13.55□□□□□ -0.24
IFT20-202ENST00000357896 G6PDP11413 515 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 CD79AP11912 226 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 ZFP36P26651 326 aaKnown RBP13.55□□□□□ -0.24
IFT20-202ENST00000357896 LSP1P33241 339 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 RAD52P43351 418 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 SELENOVP59797 346 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 BNIP2Q12982 314 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 FXNQ16595 210 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 PCGF3Q3KNV8 242 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
IFT20-202ENST00000357896 AVPI1Q5T686 147 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 SAXO2Q658L1 398 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 SYT10Q6XYQ8 523 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 DOK3Q7L591 496 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 RETREG3Q86VR2 466 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 OR8J2Q8NGG1 315 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 MFSD8Q8NHS3 518 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 LRRC58Q96CX6 371 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 ZNF837Q96EG3 531 aaPredicted RBP13.55□□□□□ -0.24
IFT20-202ENST00000357896 NEURL3Q96EH8 262 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 OPN4Q9UHM6 478 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 DSPPQ9NZW4 1301 aa13.55□□□□□ -0.24
IFT20-202ENST00000357896 PRSS51A0A1B0GVH4 220 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 PRAMEF27A3QJZ7 478 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 AKAP8O43823 692 aaKnown RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 NPHS1O60500 1241 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 AHSA1O95433 338 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 IGHV2-5P01817 119 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 HLA-HP01893 362 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 CHRNGP07510 517 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 CHI3L1P36222 383 aaPredicted RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 CRYBB2P43320 205 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 C1DQ13901 141 aaKnown RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 ANXA8L1Q5VT79 327 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 TMEM154Q6P9G4 183 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 LRRC74BQ6ZQY2 392 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 LSRQ86X29 649 aaPredicted RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 KDM8Q8N371 416 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 CADM2Q8N3J6 435 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 STK35Q8TDR2 534 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 SLC25A28Q96A46 364 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 TIMD4Q96H15 378 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 C3orf30Q96M34 536 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 SLC38A1Q9H2H9 487 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 MYEF2Q9P2K5 600 aaKnown RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 FBXL3Q9UKT7 428 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 FZR1Q9UM11 496 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 NOTCH1P46531 2555 aa13.54□□□□□ -0.24
IFT20-202ENST00000357896 PRKDCP78527 4128 aaKnown RBP13.54□□□□□ -0.24
IFT20-202ENST00000357896 DNAJC9-AS1A6NH13 148 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 C17orf100A8MU93 164 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 HMGN4O00479 90 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 NPIPB7O75200 414 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 CPSF4O95639 269 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 NUDT17P0C025 328 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 PNMTP11086 282 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 RPS4Y1P22090 263 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 MAGEB1P43366 347 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 ANXA11P50995 505 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 CCL8P80075 99 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 TXNL4AP83876 142 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 EMX2Q04743 252 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 PIGFQ07326 219 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 BAMBIQ13145 260 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 PCLAFQ15004 111 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 AGR3Q8TD06 166 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 RAB1CQ92928 201 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 SLC25A36Q96CQ1 311 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 TUBGCP3Q96CW5 907 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 NKIRAS2Q9NYR9 191 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 NOP53Q9NZM5 478 aaKnown RBP13.53□□□□□ -0.24
IFT20-202ENST00000357896 SLC7A8Q9UHI5 535 aa13.53□□□□□ -0.24
IFT20-202ENST00000357896 PPIAL4EA0A075B759 164 aa13.52□□□□□ -0.25
IFT20-202ENST00000357896 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.25
IFT20-202ENST00000357896 SLC22A23A1A5C7 686 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms