RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZIK1Q3SY52 487 aaPredicted RBP22.61■■□□□ 1.21
SSBP3-202ENST00000357475 ALG10Q5BKT4 473 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 CLEC12AQ5QGZ9 265 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 NHLRC1Q6VVB1 395 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 P4HA3Q7Z4N8 544 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 RNF122Q9H9V4 155 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 CALHM2Q9HA72 323 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 IL20Q9NYY1 176 aa22.61■■□□□ 1.21
SSBP3-202ENST00000357475 TRGV8A0A0C4DH27 118 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 CD8B2A6NJW9 211 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 GNLYP22749 145 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 NTF4P34130 210 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 POU3F1Q03052 451 aaPredicted RBP22.6■■□□□ 1.21
SSBP3-202ENST00000357475 RASGEF1BQ0VAM2 473 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 RFX4Q33E94 735 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 GCNT2Q8N0V5 402 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 IQCF1Q8N6M8 205 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 OR9K2Q8NGE7 335 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 RASD1Q9Y272 281 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 ADAM18Q9Y3Q7 739 aa22.6■■□□□ 1.21
SSBP3-202ENST00000357475 ALPK2Q86TB3 2170 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 NDUFB2O95178 105 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 SNAP29O95721 258 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 POU1F1P28069 291 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 ERVK-25P63136 954 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 PARP8Q8N3A8 854 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 OR4Q3Q8NH05 313 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 WNT2BQ93097 391 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 TXNDC15Q96J42 360 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 OXGR1Q96P68 337 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 ZNF385AQ96PM9 386 aaKnown RBP22.59■■□□□ 1.21
SSBP3-202ENST00000357475 MBOAT4Q96T53 435 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 FANCFQ9NPI8 374 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 MED29Q9NX70 200 aa22.59■■□□□ 1.21
SSBP3-202ENST00000357475 MBD3L4A6NDZ8 208 aaPredicted RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 MBD3L3A6NE82 208 aaPredicted RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 MBD3L5A6NJ08 208 aaPredicted RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 H3BN98 237 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 TRAF3IP2O43734 574 aaPredicted RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 PPP1R3DO95685 299 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 GLI4P10075 376 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 PTGER4P35408 488 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 RPL4P36578 427 aaKnown RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 CA7P43166 264 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 CTXN1P60606 82 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 EIF2S3LQ2VIR3 472 aaKnown RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 TMEM236Q5W0B7 351 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 B3GNT6Q6ZMB0 384 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 CREB3L2Q70SY1 520 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 TUSC5Q8IXB3 177 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 CLDN22Q8N7P3 220 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 ZIC4Q8N9L1 334 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 NAXEQ8NCW5 288 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 MBD3L2Q8NHZ7 208 aaPredicted RBP22.58■■□□□ 1.21
SSBP3-202ENST00000357475 TTYH2Q9BSA4 534 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 KATNB1Q9BVA0 655 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 RIBC2Q9H4K1 309 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 INIPQ9NRY2 104 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 TBC1D23Q9NUY8 699 aa22.58■■□□□ 1.21
SSBP3-202ENST00000357475 EIF4E1BA6NMX2 242 aaKnown RBP22.57■■□□□ 1.2
SSBP3-202ENST00000357475 RCBTB2O95199 551 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 SLC16A1P53985 500 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 PRPS1P60891 318 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 FOXF2Q12947 444 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 MELKQ14680 651 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 ANKDD1AQ495B1 522 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 EEF1A1P5Q5VTE0 462 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 PXKQ7Z7A4 578 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 UEVLDQ8IX04 471 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 GALNT11Q8NCW6 608 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 DNAJC9Q8WXX5 260 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 TSSK6Q9BXA6 273 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 TOR3AQ9H497 397 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 FLVCR1Q9Y5Y0 555 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 ZNF462Q96JM2 2506 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 LOC102725191A0A1B0GVB3 256 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 IFNGR1P15260 489 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 CRISP1P54107 249 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 TOP3AQ13472 1001 aaPredicted RBP22.57■■□□□ 1.2
SSBP3-202ENST00000357475 POU4F3Q15319 338 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 SLC43A2Q8N370 569 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 INTS12Q96CB8 462 aaKnown RBP22.57■■□□□ 1.2
SSBP3-202ENST00000357475 TSPAN32Q96QS1 320 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 GPX7Q96SL4 187 aaPredicted RBP22.57■■□□□ 1.2
SSBP3-202ENST00000357475 EMC6Q9BV81 110 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 SF3B5Q9BWJ5 86 aaKnown RBP22.57■■□□□ 1.2
SSBP3-202ENST00000357475 GABARAPL3Q9BY60 117 aa22.57■■□□□ 1.2
SSBP3-202ENST00000357475 ESPL1Q14674 2120 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 IGKV3D-15A0A087WSY6 115 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 PYCARD-AS1I3L0S3 204 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 BHLHE40O14503 412 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 VAMP5O95183 116 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 STSP08842 583 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 FCGR2AP12318 317 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 ZNF43P17038 809 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 EDNRAP25101 427 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 PMPCAQ10713 525 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 C1DQ13901 141 aaKnown RBP22.56■■□□□ 1.2
SSBP3-202ENST00000357475 ACKR1Q16570 336 aa22.56■■□□□ 1.2
SSBP3-202ENST00000357475 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms