RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 METRNLQ641Q3 311 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 TBC1D3GQ6DHY5 549 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 TBC1D3CQ6IPX1 549 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 ASPGQ86U10 573 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 NRSN1Q8IZ57 195 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 TBC1D3Q8IZP1 549 aaPredicted RBP12.48□□□□□ -0.41
TRIM4-203ENST00000355947 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
TRIM4-203ENST00000355947 FITM1A5D6W6 292 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 C5orf51A6NDU8 294 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 HIST1H2ABP04908 130 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 CST5P28325 142 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-203ENST00000355947 LIPNQ5VXI9 398 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 JAGN1Q8N5M9 183 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 OR5AK2Q8NH90 309 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 FAM46BQ96A09 425 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 LRRC3BQ96PB8 259 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 SHARPINQ9H0F6 387 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 TAS2R5Q9NYW4 299 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 EDARQ9UNE0 448 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 SCN5AQ14524 2016 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 ACSM1Q08AH1 577 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 PDGFRLQ15198 375 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 ZNF660Q6AZW8 331 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-203ENST00000355947 VITQ6UXI7 678 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 DPY19L4Q7Z388 723 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 MRGPREQ86SM8 312 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 ZNF619Q8N2I2 560 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-203ENST00000355947 POFUT1Q9H488 388 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 PRSS16Q9NQE7 514 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 FOXJ3Q9UPW0 622 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 SLC6A5Q9Y345 797 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 STON1Q9Y6Q2 735 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 KIF26AQ9ULI4 1882 aaPredicted RBP12.47□□□□□ -0.41
TRIM4-203ENST00000355947 OR6C68A6NDL8 312 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 F8W036 122 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 AIPO00170 330 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 TGM6O95932 706 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 HPGDP15428 266 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 EPCAMP16422 314 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 CEBPBP17676 345 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 BLOC1S1P78537 153 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 PWWP2BQ6NUJ5 590 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 ARHGAP11AQ6P4F7 1023 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 KRT77Q7Z794 578 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 LRRTM1Q86UE6 522 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 STEAP2Q8NFT2 490 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 C19orf43Q9BQ61 176 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
TRIM4-203ENST00000355947 SRMSQ9H3Y6 488 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 GPR34Q9UPC5 381 aa12.47□□□□□ -0.41
TRIM4-203ENST00000355947 MRPS2Q9Y399 296 aaKnown RBP12.47□□□□□ -0.41
TRIM4-203ENST00000355947 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 C17orf113A0A1B0GUU1 675 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 A0A1B0GW55 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 OTOL1A6NHN0 477 aaPredicted RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4L2P0CJ85 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4L3P0CJ86 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4L4P0CJ87 422 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4L5P0CJ88 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4L6P0CJ89 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4L7P0CJ90 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 FRKP42685 505 aaPredicted RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 BDH1Q02338 343 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 TMEM35AQ53FP2 167 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 RPL22L1Q6P5R6 122 aaKnown RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 TMEM64Q6YI46 380 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 SFXN5Q8TD22 340 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 MRPS24Q96EL2 167 aaKnown RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DUX4Q9UBX2 424 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ATXN7L1Q9ULK2 861 aaPredicted RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ZNF281Q9Y2X9 895 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 B3GALT2O43825 422 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 DBIP07108 87 aaKnown RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 NGFRP08138 427 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CSF2RAP15509 400 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ACTA2P62736 377 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ACTG2P63267 376 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 RBMS2Q15434 407 aaKnown RBP12.46□□□□□ -0.41
TRIM4-203ENST00000355947 PDSS1Q5T2R2 415 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 ZNF626Q68DY1 528 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CDH26Q8IXH8 852 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CCL4L1Q8NHW4 92 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 SLC25A36Q96CQ1 311 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 KXD1Q9BQD3 176 aa12.46□□□□□ -0.41
TRIM4-203ENST00000355947 CCDC3Q9BQI4 270 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms