RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HERC1Q15751 4861 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 LOC100131303A0A0U1RQF7 123 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CEACAM4O75871 244 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KRT14P02533 472 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 S100A9P06702 114 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 UBCP0CG48 685 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ABOP16442 354 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 NUP62P37198 522 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 UQCRFS1P47985 274 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ARRB1P49407 418 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ARHGDIAP52565 204 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 IST1P53990 364 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SLC8A3P57103 927 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP10-11P60412 298 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PAX5Q02548 391 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZFP36L1Q07352 338 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 IL18Q14116 193 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SNAI3Q3KNW1 292 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OR52E8Q6IFG1 317 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 C1orf94Q6P1W5 598 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SYCE2Q6PIF2 218 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 TPRA1Q86W33 373 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CMTM1Q8IZ96 169 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 FAM184AQ8NB25 1140 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 Q8NBF4 154 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZPLD1Q8TCW7 415 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CAPSLQ8WWF8 208 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 UFD1Q92890 307 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 C18orf12Q96KH6 178 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 COL21A1Q96P44 957 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 EPYCQ99645 322 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MRPL45Q9BRJ2 306 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MRPL37Q9BZE1 423 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 NXF3Q9H4D5 531 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 AUNIPQ9H7T9 357 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 STK38LQ9Y2H1 464 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF256Q9Y2P7 627 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MMP24Q9Y5R2 645 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KPTNQ9Y664 436 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MROH5Q6ZUA9 1318 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 DENND4BO75064 1496 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MLH3Q9UHC1 1453 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 RLFQ13129 1914 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 LRRK1Q38SD2 2015 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 TRAV9-2A0A087WT02 112 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 BLOC1S5-TXNDC5H3BN57 136 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CDX4O14627 284 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 NDUFS6O75380 124 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SLITRK3O94933 977 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 GNA14O95837 355 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 FGGP02679 453 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SERPINB2P05120 415 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PVRP15151 417 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PTNP21246 168 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP5-9P26371 169 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 DAP3P51398 398 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 DAOAP59103 153 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 VLDLRP98155 873 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CALCOCO2Q13137 446 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CRMP1Q14194 572 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 FASTKQ14296 549 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF77Q15935 545 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 C17orf58Q2M2W7 97 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 NSUN5P1Q3KNT7 163 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF876PQ49A33 203 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 HSP90AA4PQ58FG1 418 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 FBXO48Q5FWF7 155 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 LINC00242Q5T6M2 205 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SLC25A25Q6KCM7 469 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CSGALNACT2Q8N6G5 542 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OR5T2Q8NGG2 359 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OR1S2Q8NGQ3 325 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 UBE2E3Q969T4 207 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ASB9Q96DX5 294 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 GMPPAQ96IJ6 420 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 LRRIQ1Q96JM4 1722 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SERAC1Q96JX3 654 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 C7orf34Q96L11 122 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ALS2Q96Q42 1657 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KLHDC3Q9BQ90 382 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 NAT10Q9H0A0 1025 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF696Q9H7X3 374 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CAB39LQ9H9S4 337 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CUTCQ9NTM9 273 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MRPL22Q9NWU5 206 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 THYN1Q9P016 225 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MGAT4AQ9UM21 535 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 FRAS1Q86XX4 4008 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KIF26BQ2KJY2 2108 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PHF3Q92576 2039 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PZPP20742 1482 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 A0A0G2JRQ6 117 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RBMY1BA6NDE4 496 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RBMY1EA6NEQ0 496 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 C12orf71A8MTZ7 269 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 TRDCB7Z8K6 153 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 NPIPA7E9PJI5 369 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 RNF113AO15541 343 aaKnown RBP1.3□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF253O75346 499 aa1.3□□□□□ -2.2
BRCA1-202ENST00000354071 WBP4O75554 376 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms