RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 NPIPA3F8WFD2 350 aa24.18■■□□□ 1.46
SSBP4-202ENST00000348495 ZNHIT1O43257 154 aa24.18■■□□□ 1.46
SSBP4-202ENST00000348495 APEHP13798 732 aaKnown RBP24.18■■□□□ 1.46
SSBP4-202ENST00000348495 CTXN1P60606 82 aa24.18■■□□□ 1.46
SSBP4-202ENST00000348495 ANKK1Q8NFD2 765 aa24.18■■□□□ 1.46
SSBP4-202ENST00000348495 RASD1Q9Y272 281 aa24.18■■□□□ 1.46
SSBP4-202ENST00000348495 HLA-DOBP13765 273 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 GRK5P34947 590 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 RPS6KA3P51812 740 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 ERVK-25P63136 954 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 PM20D2Q8IYS1 436 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 OXGR1Q96P68 337 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 TUBA1CQ9BQE3 449 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 Q9H521 79 aa24.17■■□□□ 1.46
SSBP4-202ENST00000348495 VAMP5O95183 116 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 IGHMP01871 453 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 MYF6P23409 242 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 EFNB1P98172 346 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 MYBPC1Q00872 1141 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 POU4F3Q15319 338 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 TMEM225Q6GV28 225 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 ABLIM2Q6H8Q1 611 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 ADGRE4PQ86SQ3 457 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 ZPLD1Q8TCW7 415 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 ROBO4Q8WZ75 1007 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 IER3IP1Q9Y5U9 82 aa24.16■■□□□ 1.46
SSBP4-202ENST00000348495 NPIPB13A6NJU9 1138 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 NPIPB4C9JG80 1138 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 IDH3BO43837 385 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 TXNDC12O95881 172 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 CDC42P60953 191 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 ISL1P61371 349 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 FAM81AQ8TBF8 368 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 ERMAPQ96PL5 475 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-202ENST00000348495 TSPAN32Q96QS1 320 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 APOL4Q9BPW4 351 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 POLDIP3Q9BY77 421 aaKnown RBP24.15■■□□□ 1.46
SSBP4-202ENST00000348495 HMGN1P05114 100 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 ACADSP16219 412 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 SLC17A1Q14916 467 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 PON3Q15166 354 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 ZNF362Q5T0B9 420 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-202ENST00000348495 CASP12Q6UXS9 341 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 UBE2FQ969M7 185 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 SF3B5Q9BWJ5 86 aaKnown RBP24.15■■□□□ 1.46
SSBP4-202ENST00000348495 TXNIPQ9H3M7 391 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 TVP23BQ9NYZ1 205 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 MCTS1Q9ULC4 181 aaKnown RBP24.15■■□□□ 1.46
SSBP4-202ENST00000348495 NOX1Q9Y5S8 564 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 HSPE1-MOB4S4R3N1 261 aa24.15■■□□□ 1.46
SSBP4-202ENST00000348495 IMPA2O14732 288 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 SURF4O15260 269 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 TRAF3IP2O43734 574 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-202ENST00000348495 CYTIPO60759 359 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 PLGP00747 810 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-202ENST00000348495 SDHAP31040 664 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 PTGS2P35354 604 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 POU3F1Q03052 451 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-202ENST00000348495 ACKR1Q16570 336 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 FCRLAQ7L513 359 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 GPAT4Q86UL3 456 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 C8orf59Q8N0T1 100 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-202ENST00000348495 SETD9Q8NE22 299 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 RNF128Q8TEB7 428 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 TEX12Q9BXU0 123 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 ZNF226Q9NYT6 803 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 KLHL13Q9P2N7 655 aa24.14■■□□□ 1.45
SSBP4-202ENST00000348495 SVILO95425 2214 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 ZNF716A6NP11 495 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 CLCA1A8K7I4 914 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 M0R129 80 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 PCYT1AP49585 367 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 GPR139Q6DWJ6 353 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 CHMP1BQ7LBR1 199 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 UEVLDQ8IX04 471 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 ENTHD1Q8IYW4 607 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 DEPDC4Q8N2C3 294 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 FNDC9Q8TBE3 224 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 Q96M85 177 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 SLC38A2Q96QD8 506 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 CMC2Q9NRP2 79 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 PNPLA3Q9NST1 481 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 ZNF346Q9UL40 294 aaKnown RBP24.13■■□□□ 1.45
SSBP4-202ENST00000348495 RNF6Q9Y252 685 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 ZNF175Q9Y473 711 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 A0A1W2PRG6 482 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 TTLL8A6PVC2 850 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 PRKYO43930 277 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 SERPINI2O75830 405 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 SYNGR4O95473 234 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 GABRB1P18505 474 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 SLC16A1P53985 500 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 RPL27P61353 136 aaKnown RBP24.13■■□□□ 1.45
SSBP4-202ENST00000348495 EMC4Q5J8M3 183 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 SLC35F1Q5T1Q4 408 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 ARMC4Q5T2S8 1044 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 MARVELD2Q8N4S9 558 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 ZNF519Q8TB69 540 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 FBLIM1Q8WUP2 373 aa24.13■■□□□ 1.45
SSBP4-202ENST00000348495 TRUB1Q8WWH5 349 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms