RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 UBE2FQ969M7 185 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 CPNE4Q96A23 557 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 GPX7Q96SL4 187 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 PITX2Q99697 317 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 KATNB1Q9BVA0 655 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 IFT27Q9BW83 186 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 FANCFQ9NPI8 374 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 NRIP3Q9NQ35 241 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 TIGARQ9NQ88 270 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 INIPQ9NRY2 104 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 ING1Q9UK53 422 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 NDRG4Q9ULP0 352 aaKnown RBP16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 IER3IP1Q9Y5U9 82 aa16.95■□□□□ 0.3
CHMP4A-201ENST00000347519 BCKDKO14874 412 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 RPL4P36578 427 aaKnown RBP16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 C12orf73Q69YU5 71 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 GFRALQ6UXV0 394 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 DPY19L2P2Q6ZN68 376 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 FCRLAQ7L513 359 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 FAM122BQ7Z309 247 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 PM20D2Q8IYS1 436 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 CPT1CQ8TCG5 803 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 ZPLD1Q8TCW7 415 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 ABHD3Q8WU67 409 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 ZHX1-C8orf76Q96EF9 292 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 TXNDC15Q96J42 360 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 HRASLS5Q96KN8 279 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 Q96M85 177 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 OXGR1Q96P68 337 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 TSPAN32Q96QS1 320 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 ENOPH1Q9UHY7 261 aa16.94■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF716A6NP11 495 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 TRAF3IP2O43734 574 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 CYTIPO60759 359 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 SYNGR4O95473 234 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC2A10O95528 541 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 TPOP07202 933 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 CD14P08571 375 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 GGT2P36268 569 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 TOP3AQ13472 1001 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 MELKQ14680 651 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC17A1Q14916 467 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC35F1Q5T1Q4 408 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 TMEM225Q6GV28 225 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 SLC27A4Q6P1M0 643 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF585AQ6P3V2 769 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 CHMP1BQ7LBR1 199 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 GPAT4Q86UL3 456 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 CD163Q86VB7 1156 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 LNX2Q8N448 690 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF555Q8NEP9 628 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 OR52L1Q8NGH7 329 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 FAM57AQ8TBR7 257 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF775Q96BV0 537 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 RASD2Q96D21 266 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 ERMAPQ96PL5 475 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 PAQR5Q9NXK6 330 aaPredicted RBP16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 CLCF1Q9UBD9 225 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 AASSQ9UDR5 926 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF346Q9UL40 294 aaKnown RBP16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 RASD1Q9Y272 281 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 GMPPBQ9Y5P6 360 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 MED12LQ86YW9 2145 aa16.93■□□□□ 0.3
CHMP4A-201ENST00000347519 ARHGAP21Q5T5U3 1957 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 LOC102725191A0A1B0GVB3 256 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 H0YAE9 185 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 IMPA2O14732 288 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 EDN3P14138 238 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 IFNGR1P15260 489 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 SMSP52788 366 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 POU3F1Q03052 451 aaPredicted RBP16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 DBPQ10586 325 aaPredicted RBP16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 ACKR1Q16570 336 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 ACSF3Q4G176 576 aaPredicted RBP16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF362Q5T0B9 420 aaPredicted RBP16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 RTL6Q6ICC9 239 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 USP51Q70EK9 711 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 PXKQ7Z7A4 578 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 ZIC4Q8N9L1 334 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 OR2T33Q8NG76 320 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 OR9K2Q8NGE7 335 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 RNF128Q8TEB7 428 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 TRIB1Q96RU8 372 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 POLDIP3Q9BY77 421 aaKnown RBP16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 MED29Q9NX70 200 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 TVP23BQ9NYZ1 205 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 CLEC4AQ9UMR7 237 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF835Q9Y2P0 537 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 ALPK2Q86TB3 2170 aa16.92■□□□□ 0.3
CHMP4A-201ENST00000347519 TEX13CA0A0J9YWL9 993 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 IGHMP01871 453 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 NTF4P34130 210 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 GRK5P34947 590 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 MYBPC1Q00872 1141 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 RUNX1T1Q06455 604 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 RASGEF1BQ0VAM2 473 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 KEAP1Q14145 624 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 ARMC4Q5T2S8 1044 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 ZNF691Q5VV52 312 aa16.91■□□□□ 0.3
CHMP4A-201ENST00000347519 TTC23Q5W5X9 447 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms