RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 MORN4Q8NDC4 146 aa10.05□□□□□ -0.8
CLCN6-202ENST00000346436 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
CLCN6-202ENST00000346436 RGS11O94810 467 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 VAMP1P23763 118 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PKLRP30613 574 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 IL2RGP31785 369 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 HES1Q14469 280 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SERPINA12Q8IW75 414 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 GDPD1Q8N9F7 314 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 INO80EQ8NBZ0 244 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 BEST4Q8NFU0 473 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PRR7Q8TB68 274 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PCNPQ8WW12 178 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 STEAP1Q9UHE8 339 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PTPRFP10586 1907 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ADAM23O75077 832 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SLCO2B1O94956 709 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ENTPD8Q5MY95 495 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ARSKQ6UWY0 536 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SYT14Q8NB59 555 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 DUSP19Q8WTR2 217 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ASB12Q8WXK4 309 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 DUSP21Q9H596 190 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 C12orf49Q9H741 205 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 NUDT15Q9NV35 164 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 AK6Q9Y3D8 172 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SLC22A23A1A5C7 686 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 NUDT21O43809 227 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 OLFM2O95897 454 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SLC6A12P48065 614 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 HNRNPFP52597 415 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 NUBP1P53384 320 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 EPHA5P54756 1037 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ATXN7L3Q14CW9 347 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 C18orf63Q68DL7 685 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PHC2Q8IXK0 858 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 OR7D2Q96RA2 312 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ACSS1Q9NUB1 689 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ACER3Q9NUN7 267 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ASIC5Q9NY37 505 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF337Q9Y3M9 751 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 VNN2O95498 520 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SPNP16150 400 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PSMB10P40306 273 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PSMA6P60900 246 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 DPTQ07507 201 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 EXOSC7Q15024 291 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 TATDN3Q17R31 274 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 TMEM244Q5VVB8 128 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 RTL6Q6ICC9 239 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 STT3BQ8TCJ2 826 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 PRRC1Q96M27 445 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 VN1R3Q9BXE9 311 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 CACNG6Q9BXT2 260 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 TXNL4BQ9NX01 149 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SNAPC5O75971 98 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 CNOT4O95628 575 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 IFNA7P01567 189 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 SFTPBP07988 381 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 NME1P15531 152 aaKnown RBP10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ZNF684Q5T5D7 378 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 C10orf111Q8N326 155 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 ANKRD10Q9NXR5 420 aa10.04□□□□□ -0.8
CLCN6-202ENST00000346436 MASP2O00187 686 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 FZD6O60353 706 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 IFNA5P01569 189 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 MAS1P04201 325 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 LCN1P31025 176 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SNTB2Q13425 540 aaKnown RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 GPR176Q14439 515 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SLC43A2Q8N370 569 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SDR9C7Q8NEX9 313 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 OR6T1Q8NGN1 323 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 COQ8AQ8NI60 647 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 S100PBPQ96BU1 408 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SLC25A18Q9H1K4 315 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 PRKACBP22694 351 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 DNASE1P24855 282 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 F2RL1P55085 397 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 LRRC37A5PQ49AS3 106 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 OR5W2Q8NH69 310 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 TMEM163Q8TC26 289 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 TM4SF18Q96CE8 201 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 FAM71F1Q96KD3 344 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 TESQ9UGI8 421 aaKnown RBP10.03□□□□□ -0.8
CLCN6-202ENST00000346436 PRELID3BQ9Y3B1 194 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SPTY2D1-AS1A0A0U1RR47 76 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 ZSCAN5BA6NJL1 495 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 FAM90A27PA6NNH2 459 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 GFYI3L273 518 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SUSD5O60279 629 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 FZD7O75084 574 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 GPX5O75715 221 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 C1QCP02747 245 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 SCG5P05408 212 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 H2AFB2P0C5Z0 115 aa10.03□□□□□ -0.8
CLCN6-202ENST00000346436 MLLT11Q13015 90 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms