RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FABP9Q0Z7S8 132 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ERN2Q76MJ5 926 aaKnown RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ABHD12BQ7Z5M8 362 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 OR52B4Q8NGK2 314 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 UBQLN3Q9H347 655 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 TMPRSS5Q9H3S3 457 aa11.23□□□□□ -0.61
COL12A1-202ENST00000345356 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-202ENST00000345356 C17orf113A0A1B0GUU1 675 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 PPP5D1E7EU14 171 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 SDHAP31040 664 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 EPHA4P54764 986 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 C2orf27AQ580R0 203 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 UPRTQ96BW1 309 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 SELENOIQ9C0D9 397 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CHST8Q9H2A9 424 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CERS4Q9HA82 394 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 A0A1W2PPV4 95 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 DRGXA6NNA5 263 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CYB5BO43169 146 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 MT-CO2P00403 227 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 TNFP01375 233 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 NPY4RP50391 375 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 RAB11AP62491 216 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 SEMA3BQ13214 749 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF266Q14584 549 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 OR7A5Q15622 319 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 SLC14A2Q15849 920 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 EXOSC6Q5RKV6 272 aaKnown RBP11.22□□□□□ -0.61
COL12A1-202ENST00000345356 MRPL2Q5T653 305 aaKnown RBP11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF611Q8N823 705 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZSCAN4Q8NAM6 433 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-202ENST00000345356 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 BTF3L4Q96K17 158 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CD63P08962 238 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CCL14Q16627 93 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 OR2T2Q6IF00 324 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM99Q8N816 258 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CHST14Q8NCH0 376 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 OR6S1Q8NH40 331 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 LRIG1Q96JA1 1093 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 KCMF1Q9P0J7 381 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 KLHL13Q9P2N7 655 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF230Q9UIE0 474 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-202ENST00000345356 BCL2L11O43521 198 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CD70P32970 193 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 NKG7Q16617 165 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF836Q6ZNA1 936 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 OR9K2Q8NGE7 335 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 SFT2D1Q8WV19 159 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 IRF7Q92985 503 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 C1QTNF3Q9BXJ4 246 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 VSX1Q9NZR4 365 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-202ENST00000345356 NALCNQ8IZF0 1738 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 LRP6O75581 1613 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZFP92A6NM28 416 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 PCMT1P22061 227 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ASB17Q8WXJ9 295 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 NEURL3Q96EH8 262 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF251Q9BRH9 671 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 HINT2Q9BX68 163 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 TAS2R5Q9NYW4 299 aa11.22□□□□□ -0.61
COL12A1-202ENST00000345356 ZC3H12DA2A288 527 aaKnown RBP11.21□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF98A6NK75 572 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 FOXE1O00358 373 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-202ENST00000345356 HRO43593 1189 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 PSMB6P28072 239 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 ALKBH1Q13686 389 aaKnown RBP11.21□□□□□ -0.61
COL12A1-202ENST00000345356 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 SYT9Q86SS6 491 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 PGBD5Q8N414 524 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 OR1J2Q8NGS2 313 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 NMNAT3Q96T66 252 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 ANKRD61A6NGH8 418 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF724A8MTY0 619 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 SMAD6O43541 496 aaKnown RBP11.21□□□□□ -0.61
COL12A1-202ENST00000345356 F13BP05160 661 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 FASLGP48023 281 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 OPN5Q6U736 354 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF852Q6ZMS4 543 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 SLC35D2Q76EJ3 337 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 SSX7Q7RTT5 188 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 OR10D4PQ8NGN7 298 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 WDFY2Q96P53 400 aa11.21□□□□□ -0.61
COL12A1-202ENST00000345356 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 LATO43561 262 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 LPLP06858 475 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF888P0CJ79 500 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-202ENST00000345356 CALCBP10092 127 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 RRASP10301 218 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 TRA2BP62995 288 aaKnown RBP11.21□□□□□ -0.62
COL12A1-202ENST00000345356 TPBGQ13641 420 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 GLYATL3Q5SZD4 288 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-202ENST00000345356 RTL6Q6ICC9 239 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 OLIG3Q7RTU3 272 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms