RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MAGEB18Q96M61 343 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 ZNF587Q96SQ5 575 aaPredicted RBP10.84□□□□□ -0.67
SGCA-202ENST00000344627 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 CPPED1Q9BRF8 314 aaPredicted RBP10.84□□□□□ -0.67
SGCA-202ENST00000344627 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 BEX2Q9BXY8 128 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 NPHS2Q9NP85 383 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 SEC14L4Q9UDX3 406 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 NDUFAF1Q9Y375 327 aa10.84□□□□□ -0.67
SGCA-202ENST00000344627 CHD3Q12873 2000 aaKnown RBP10.84□□□□□ -0.67
SGCA-202ENST00000344627 RTTNQ86VV8 2226 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 A0A096LNT2 108 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 A0A0G2JND7 137 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 FTCDNL1E5RQL4 147 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 ATP6V1G2-DDX39BF2Z307 99 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 PDE5AO76074 875 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 HNF1AP20823 631 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 USF1P22415 310 aaPredicted RBP10.83□□□□□ -0.68
SGCA-202ENST00000344627 GRPRP30550 384 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 CAPZA2P47755 286 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 NFYCQ13952 458 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 FAM69AQ5T7M9 428 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 VHLLQ6RSH7 139 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 C5orf46Q6UWT4 87 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 DLEU7Q6UYE1 221 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 H1FNTQ75WM6 255 aaPredicted RBP10.83□□□□□ -0.68
SGCA-202ENST00000344627 COMTD1Q86VU5 262 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 RANBP3LQ86VV4 465 aaPredicted RBP10.83□□□□□ -0.68
SGCA-202ENST00000344627 UEVLDQ8IX04 471 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 LSMEM1Q8N8F7 131 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 C11orf65Q8NCR3 313 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 BHLHE22Q8NFJ8 381 aaPredicted RBP10.83□□□□□ -0.68
SGCA-202ENST00000344627 SLC38A2Q96QD8 506 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 EPYCQ99645 322 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 ASPNQ9BXN1 380 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 SHARPINQ9H0F6 387 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 TMEM38AQ9H6F2 299 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 C12orf10Q9HB07 376 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 SLC52A3Q9NQ40 469 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 TESQ9UGI8 421 aaKnown RBP10.83□□□□□ -0.68
SGCA-202ENST00000344627 FBN1P35555 2871 aaKnown RBP10.83□□□□□ -0.68
SGCA-202ENST00000344627 COL6A5A8TX70 2615 aa10.83□□□□□ -0.68
SGCA-202ENST00000344627 ATRQ13535 2644 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 ARFGEF3Q5TH69 2177 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 TRBV5-3A0A0A0MS03 114 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 IGHV1-18A0A0C4DH31 117 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 AKAP8O43823 692 aaKnown RBP10.82□□□□□ -0.68
SGCA-202ENST00000344627 CRYAAP02489 173 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 GPX2P18283 190 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 PDLIM4P50479 330 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 MTPNP58546 118 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
SGCA-202ENST00000344627 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
SGCA-202ENST00000344627 PMS2P3Q13401 168 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 MFSD13AQ14CX5 517 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 RUNDC3AQ59EK9 446 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 FAM91A1Q658Y4 838 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 ANKRD16Q6P6B7 361 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 C6orf89Q6UWU4 347 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 LINGO2Q7L985 606 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 NET1Q7Z628 596 aaPredicted RBP10.82□□□□□ -0.68
SGCA-202ENST00000344627 FAM169BQ8N8A8 192 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 ANKK1Q8NFD2 765 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 MAGEE2Q8TD90 523 aaPredicted RBP10.82□□□□□ -0.68
SGCA-202ENST00000344627 C10orf105Q8TEF2 133 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 BCL2L2Q92843 193 aaPredicted RBP10.82□□□□□ -0.68
SGCA-202ENST00000344627 MCHR1Q99705 422 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 RSPO3Q9BXY4 272 aaPredicted RBP10.82□□□□□ -0.68
SGCA-202ENST00000344627 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 KLHL14Q9P2G3 628 aa10.82□□□□□ -0.68
SGCA-202ENST00000344627 IGKV1D-42A0A075B6H8 117 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 A0A087WUJ7 227 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 LOC390937A0A1W2PQ73 354 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 M0QX08 132 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 M0R3G1 203 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 M0R3H8 397 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 LMX1BO60663 402 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 SERPINI2O75830 405 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 MFN2O95140 757 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 OR6A2O95222 327 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 OPN1SWP03999 348 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 ERCC1P07992 297 aaPredicted RBP10.81□□□□□ -0.68
SGCA-202ENST00000344627 AHCYP23526 432 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 CDH12P55289 794 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 SH3BGRP55822 239 aaPredicted RBP10.81□□□□□ -0.68
SGCA-202ENST00000344627 SNRPD2P62316 118 aaKnown RBP10.81□□□□□ -0.68
SGCA-202ENST00000344627 SF3A3Q12874 501 aaKnown RBP eCLIP10.81□□□□□ -0.68
SGCA-202ENST00000344627 ADRM1Q16186 407 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 CARTPTQ16568 116 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 PHC2Q8IXK0 858 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 ZNF525Q8N782 197 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 PIK3C3Q8NEB9 887 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 VANGL1Q8TAA9 524 aaPredicted RBP10.81□□□□□ -0.68
SGCA-202ENST00000344627 SLC26A7Q8TE54 656 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 ANKRD27Q96NW4 1050 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 CGREF1Q99674 301 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 VRK1Q99986 396 aaPredicted RBP10.81□□□□□ -0.68
SGCA-202ENST00000344627 PIMREGQ9BSJ6 248 aa10.81□□□□□ -0.68
SGCA-202ENST00000344627 EMC6Q9BV81 110 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms