RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 MAML2Q8IZL2 1156 aaPredicted RBP15.05■□□□□ -0
SMARCA4-201ENST00000344626 NPRL2Q8WTW4 380 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 CA5BP1Q8WTZ4 195 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 AKAP1Q92667 903 aaKnown RBP eCLIP15.05■□□□□ -0
SMARCA4-201ENST00000344626 VN1R1Q9GZP7 353 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 FAM60AQ9NP50 221 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 PROCRQ9UNN8 238 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 LINC01387J3KSC0 135 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 LGI1O95970 557 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 ACER2Q5QJU3 275 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 MOB3CQ70IA8 216 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 FAM57BQ71RH2 274 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 ANKRD53Q8N9V6 530 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 ZBTB8AQ96BR9 441 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 MRGPRX4Q96LA9 322 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 VRK1Q99986 396 aaPredicted RBP15.05■□□□□ -0
SMARCA4-201ENST00000344626 ALG12Q9BV10 488 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 UCK1Q9HA47 277 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 IGHV5-10-1A0A0J9YXX1 117 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 PRAMEF27A3QJZ7 478 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 ICOSLGO75144 302 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 TBC1D28Q2M2D7 210 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 TMEM255BQ8WV15 326 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 NXF5Q9H1B4 397 aaKnown RBP15.05■□□□□ -0
SMARCA4-201ENST00000344626 TAS2R8Q9NYW2 309 aa15.05■□□□□ -0
SMARCA4-201ENST00000344626 CHMP24386 653 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 DUSP2Q05923 314 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 ILKQ13418 452 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 JMJD6Q6NYC1 403 aaPredicted RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 ZCCHC14Q8WYQ9 949 aaKnown RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 ISOC1Q96CN7 298 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 SPACA9Q96E40 222 aaPredicted RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 TCFL5Q9UL49 500 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 OR14I1A6ND48 311 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 SCGB1D2O95969 90 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 RPS23P62266 143 aaKnown RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 GPR50Q13585 617 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 GLYR1Q49A26 553 aaPredicted RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 ZNF628Q5EBL2 1059 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 SLC15A4Q8N697 577 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 PIGCQ92535 297 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 C4orf36Q96KX1 117 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 VSX1Q9NZR4 365 aaPredicted RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 FAM183AA6NL82 134 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 HMGCLL1Q8TB92 370 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 CSF3RQ99062 836 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 CHST11Q9NPF2 352 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 PIEZO1Q92508 2521 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 TRAPPC2LH3BP13 241 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 ABHD16AO95870 558 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 FCER2P06734 321 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 PRKACBP22694 351 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 MAGEA2P43356 314 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 ACTBP60709 375 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 ACTG1P63261 375 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 OR7E24Q6IFN5 339 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 BEND4Q6ZU67 534 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 BCL7BQ9BQE9 202 aa15.04■□□□□ -0
SMARCA4-201ENST00000344626 PAPOLGQ9BWT3 736 aaKnown RBP15.04■□□□□ -0
SMARCA4-201ENST00000344626 ZNF385BQ569K4 471 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 UGT2A3Q6UWM9 527 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 THAP6Q8TBB0 222 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 TEX37Q96LM6 180 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 GPR87Q9BY21 358 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 CHIAQ9BZP6 476 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 COPZ2Q9P299 210 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 HIF3AQ9Y2N7 669 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 UPK1AO00322 258 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 LRRC56Q8IYG6 542 aaPredicted RBP15.03■□□□□ -0
SMARCA4-201ENST00000344626 KDM8Q8N371 416 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 SLC29A1Q99808 456 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 FAM173AQ9BQD7 235 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 BABAM2Q9NXR7 383 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 CXCL13O43927 109 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 GM2AP17900 193 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 MFAP5Q13361 173 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 NKG7Q16617 165 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 ZNF684Q5T5D7 378 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 USB1Q9BQ65 265 aaKnown RBP15.03■□□□□ -0
SMARCA4-201ENST00000344626 WDR76Q9H967 626 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 TDRD6O60522 2096 aaKnown RBP15.03■□□□□ -0
SMARCA4-201ENST00000344626 AKR7A3O95154 331 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 OR2T7P0C7T2 308 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 PSMB10P40306 273 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 TGIF1Q15583 401 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 RPL22L1Q6P5R6 122 aaKnown RBP15.03■□□□□ -0
SMARCA4-201ENST00000344626 OR2T27Q8NH04 317 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 AMBRA1Q9C0C7 1298 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 SPNS1Q9H2V7 528 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 NOTCH2Q04721 2471 aa15.03■□□□□ -0
SMARCA4-201ENST00000344626 FAM90A27PA6NNH2 459 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 DRD5P21918 477 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 FXYD6P3P58550 94 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 GPR176Q14439 515 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 TBPL2Q6SJ96 375 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 LINC01555Q8NAE3 123 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 BCL2L10Q9HD36 194 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 EML2O95834 649 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 MPIG6BO95866 241 aa15.02■□□□□ -0
SMARCA4-201ENST00000344626 PRH1P02810 166 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms