RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 C11orf98E9PRG8 122 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 LMO7DNF2Z398 122 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 DDAH2O95865 285 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SOX2P48431 317 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 HNRNPKP61978 463 aaKnown RBP eCLIP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 RRAS2P62070 204 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 TDGQ13569 410 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 NSDHLQ15738 373 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 TOMM5Q8N4H5 51 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 OR1L3Q8NH93 324 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 TAAR8Q969N4 342 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 ADAD1Q96M93 576 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 MBTPS2O43462 519 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SRMP19623 302 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SDHAP31040 664 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 PLA1AQ53H76 456 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SIAH3Q8IW03 269 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SERPINA12Q8IW75 414 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF721Q8TF20 911 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 RGP1Q92546 391 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 MRPL48Q96GC5 212 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 TSPAN32Q96QS1 320 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 GPX7Q96SL4 187 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SYNDIG1Q9H7V2 258 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 MRPL15Q9P015 296 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 ING1Q9UK53 422 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 IKZF2Q9UKS7 526 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 RP1P56715 2156 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 A0A0A6YYJ9 748 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 FRG2CA6NGY1 282 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF879B4DU55 563 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 GATBO75879 557 aaKnown RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 PLGP00747 810 aaPredicted RBP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 FOLR1P15328 257 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC36A2Q495M3 483 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 MESTQ5EB52 335 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 HLA-DQA1Q5Y7H0 255 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 C9orf40Q8IXQ3 194 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 BMPERQ8N8U9 685 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 LRRC75AQ8NAA5 344 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 OR6N2Q8NGY6 317 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 AKAP1Q92667 903 aaKnown RBP eCLIP13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC25A36Q96CQ1 311 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 MSANTD3Q96H12 275 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 ING3Q9NXR8 418 aa13.54□□□□□ -0.24
VIPAS39-202ENST00000343765 EML5Q05BV3 1969 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 SCO2O43819 266 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 MT-ND4P03905 459 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 HIST1H2ABP04908 130 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 ASAH2BP0C7U1 165 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 GIFP27352 417 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 CCR6P51684 374 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 NDUFA5Q16718 116 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 HIST3H2AQ7L7L0 130 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 TCTE3Q8IZS6 198 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 FAM174AQ8TBP5 190 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 HIST1H2ACQ93077 130 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 ADIPOR1Q96A54 375 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 PHF21AQ96BD5 680 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 GFI1Q99684 422 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 SYT4Q9H2B2 425 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 ABRACLQ9P1F3 81 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 EPHA6Q9UF33 1036 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 ZNF281Q9Y2X9 895 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 UBL3O95164 117 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 IGKV3-11P04433 115 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 SNRPD2P62316 118 aaKnown RBP13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 HSD11B2P80365 405 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 CFHR1Q03591 330 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 CMTM4Q8IZR5 234 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 OR6V1Q8N148 313 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 WDR76Q9H967 626 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 MMACHCQ9Y4U1 282 aa13.53□□□□□ -0.24
VIPAS39-202ENST00000343765 ARHGEF9O43307 516 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 NDUFB5O43674 189 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 FBLP22087 321 aaKnown RBP13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 CXCR1P25024 350 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 UQCRC1P31930 480 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 GALNSP34059 522 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 ADH7P40394 386 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 CENPAP49450 140 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 NXPH1P58417 271 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 PLCXD2Q0VAA5 305 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 COL19A1Q14993 1142 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 EBPQ15125 230 aaKnown RBP13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 LIPNQ5VXI9 398 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 LINGO2Q7L985 606 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.24
VIPAS39-202ENST00000343765 KANSL1Q7Z3B3 1105 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms