RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HOXB5P09067 269 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 ZGLP1P0C6A0 271 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 NPPBP16860 134 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 HOXA5P20719 270 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 SLC2A5P22732 501 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 SERPINA4P29622 427 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 BEX3Q00994 111 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 BEX5Q5H9J7 111 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 PYY3Q5JQD4 70 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 NXPE4Q6UWF7 544 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 TMPRSS11FQ6ZWK6 438 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 GDF7Q7Z4P5 450 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 HS6ST3Q8IZP7 471 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 MEGF10Q96KG7 1140 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 SMAD5Q99717 465 aaKnown RBP16.99■□□□□ 0.31
SMPD1-201ENST00000342245 OR51V1Q9H2C8 321 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 TRPV4Q9HBA0 871 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 PCDHGA1Q9Y5H4 931 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 NPIPB15A6NHN6 443 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-201ENST00000342245 ADH1CP00326 375 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 OR2T7P0C7T2 308 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 EDNRAP25101 427 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 ITPKBP27987 946 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 AVPR2P30518 371 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 SGSHP51688 502 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 C16orf59Q7L2K0 433 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 OR2T27Q8NH04 317 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 HCAR1Q9BXC0 346 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 SUV39H2Q9H5I1 410 aa16.99■□□□□ 0.31
SMPD1-201ENST00000342245 CD5P06127 495 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 CDX1P47902 265 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 ACTBP60709 375 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TBPL1P62380 186 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 ACTG1P63261 375 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 MRPS6P82932 125 aaKnown RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 HGFACQ04756 655 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 ADGRF1Q5T601 910 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 UNQ6126/PRO20091Q6UXV3 157 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 DND1Q8IYX4 353 aaKnown RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 CHST6Q9GZX3 395 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 SEMA6CQ9H3T2 930 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 RPS10P5Q9NQ39 176 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 ZCCHC3Q9NUD5 404 aaKnown RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 POT1Q9NUX5 634 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 PARPBPQ9NWS1 579 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 MAGEB4O15481 346 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 FAM157CP0CG43 387 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 HIST1H1BP16401 226 aaKnown RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 MPIP34949 423 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 FOXK2Q01167 660 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 MST1LQ2TV78 715 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TP53I3Q53FA7 332 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 AWAT2Q6E213 333 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 STEAP1BQ6NZ63 245 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 LCTLQ6UWM7 567 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM64Q6YI46 380 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 SZRD1Q7Z422 152 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 LRRTM1Q86UE6 522 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM173Q86WV6 379 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 SFXN5Q8TD22 340 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 RHOVQ96L33 236 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 CDC6Q99741 560 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 LAT2Q9GZY6 243 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 PRDM13Q9H4Q3 707 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 MEPEQ9NQ76 525 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 NCDNQ9UBB6 729 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 CACFD1Q9UGQ2 172 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 MBD1Q9UIS9 605 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 CA14Q9ULX7 337 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM184BQ9Y519 407 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TRPV2Q9Y5S1 764 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 DOCK6Q96HP0 2047 aa16.98■□□□□ 0.31
SMPD1-201ENST00000342245 TMEM88BA6NKF7 163 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 CDC42EP2O14613 210 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 PTHLHP12272 177 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 PKIAP61925 76 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 PRKCZQ05513 592 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TCEAL6Q6IPX3 200 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 EIF5AL1Q6IS14 154 aaKnown RBP16.97■□□□□ 0.31
SMPD1-201ENST00000342245 GALNT16Q8N428 558 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 DCAF4L2Q8NA75 395 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 SMIM8Q96KF7 97 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 SGPP1Q9BX95 441 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 FAM86C1Q9NVL1 165 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TP53TG5Q9Y2B4 290 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 PIN1P1O15428 100 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 PPP1R3DO95685 299 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 CTSLP07711 333 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 ACKR3P25106 362 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TEAD1P28347 426 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TOMM20Q15388 145 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 CCSMST1Q4G0I0 132 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 MRM1Q6IN84 353 aaKnown RBP16.97■□□□□ 0.31
SMPD1-201ENST00000342245 OR10R2Q8NGX6 335 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 TIFAQ96CG3 184 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 CPNE2Q96FN4 548 aaPredicted RBP16.97■□□□□ 0.31
SMPD1-201ENST00000342245 OR5B2Q96R09 309 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 MCHR1Q99705 422 aa16.97■□□□□ 0.31
SMPD1-201ENST00000342245 CHST5Q9GZS9 411 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms