RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 NPIPB9F8W1W9 429 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZXDAP98168 799 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 SLC25A35Q3KQZ1 300 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ATG4DQ86TL0 474 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 COMMD2Q86X83 199 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 DNAAF1Q8NEP3 725 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 OR4K17Q8NGC6 315 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 NAT6Q93015 286 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 SLC25A46Q96AG3 418 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 TMCO6Q96DC7 493 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF285Q96NJ3 590 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 BEX1Q9HBH7 125 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 PHF3Q92576 2039 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 CCDC182A6NF36 153 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 TRIM64BA6NI03 449 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 MPZL1O95297 269 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 MAS1P04201 325 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 CD14P08571 375 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 FOXF1Q12946 379 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 OR7E24Q6IFN5 339 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 CORO6Q6QEF8 472 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 VASH1Q7L8A9 365 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 LSMEM1Q8N8F7 131 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ENKURQ8TC29 256 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 TSEN15Q8WW01 171 aaKnown RBP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF578Q96N58 590 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 OR5B2Q96R09 309 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 KCNN2Q9H2S1 579 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 DOCK7Q96N67 2140 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ASPMQ8IZT6 3477 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 IGKV3D-11A0A0A0MRZ8 115 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 TALDO1P37837 337 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 RFC3P40938 356 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF41P51814 821 aaPredicted RBP9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 C19orf57Q0VDD7 668 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 GALEQ14376 348 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ACKR1Q16570 336 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 MDGA2Q7Z553 956 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF440Q8IYI8 595 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 CADM3Q8N126 398 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 AGBL5Q8NDL9 886 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF248Q8NDW4 579 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 AP3S1Q92572 193 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 TSPAN32Q96QS1 320 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF160Q9HCG1 818 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 CHRNA9Q9UGM1 479 aa9.23□□□□□ -0.93
RBFOX1-202ENST00000340209 PSKH1P11801 424 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 RBM34P42696 430 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 PRPS1P60891 318 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 PSPHP78330 225 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 TPBGQ13641 420 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 SF3A2Q15428 464 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 C1orf140Q5VVS0 124 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 DPY19L2P2Q6ZN68 376 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 CPEB2Q7Z5Q1 589 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 Q8N402 240 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 ABHD4Q8TB40 342 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 PPP1R14AQ96A00 147 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 KCNG2Q9UJ96 466 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 KLHDC2Q9Y2U9 406 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 BLACEA4D250 179 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 NPIPA5E9PKD4 350 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 JMJD7P0C870 316 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 EFNB1P98172 346 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF45Q02386 682 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 METAP1DQ6UB28 335 aaPredicted RBP9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 NUP54Q7Z3B4 507 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 TMEM105Q8N8V8 129 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 NPEPL1Q8NDH3 523 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 PELI1Q96FA3 418 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 SEMA4CQ9C0C4 833 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 ERVMER34-1Q9H9K5 563 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 NKIRAS2Q9NYR9 191 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 PLEKHB1Q9UF11 243 aaPredicted RBP9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 ZMIZ1Q9ULJ6 1067 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 NPIPA1Q9UND3 350 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 B3GALT1Q9Y5Z6 326 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 IGHV3-15A0A0B4J1V0 119 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 SEC14L5O43304 696 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 IL7P13232 177 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 ADAM8P78325 824 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 TLE3Q04726 772 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 TMEM91Q6ZNR0 172 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 MAMDC2Q7Z304 686 aaPredicted RBP9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 PRSS42Q7Z5A4 293 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
RBFOX1-202ENST00000340209 SAGE2PA6NJ88 616 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 D6RAR5 112 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 CER1O95813 267 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 KRT8P05787 483 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 OXA1LQ15070 435 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 MESTQ5EB52 335 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 RAET1LQ5VY80 246 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 OR6V1Q8N148 313 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 OR4D9Q8NGE8 314 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 OR52N1Q8NH53 320 aa9.21□□□□□ -0.93
RBFOX1-202ENST00000340209 INIPQ9NRY2 104 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms