RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 PITX2Q99697 317 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 IFT27Q9BW83 186 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 TSSK6Q9BXA6 273 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 TBC1D23Q9NUY8 699 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 HIF3AQ9Y2N7 669 aa13.2□□□□□ -0.3
CSRP1-201ENST00000340006 AQP7P3A6NL99 342 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 CLCA1A8K7I4 914 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 KLK2P20151 261 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 NOS3P29474 1203 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 RPS6KA3P51812 740 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 CTXN1P60606 82 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 H3F3AP84243 136 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 C1DQ13901 141 aaKnown RBP13.19□□□□□ -0.3
CSRP1-201ENST00000340006 PTGES3Q15185 160 aaKnown RBP13.19□□□□□ -0.3
CSRP1-201ENST00000340006 GTF2IRD2BQ6EKJ0 949 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF620Q6ZNG0 422 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 THAP5Q7Z6K1 395 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 GTF2IRD2Q86UP8 949 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 FNDC9Q8TBE3 224 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 CDH10Q9Y6N8 788 aa13.19□□□□□ -0.3
CSRP1-201ENST00000340006 COL6A6A6NMZ7 2263 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 RP1L1Q8IWN7 2480 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 SLC22A20A6NK97 555 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 EIF4E1BA6NMX2 242 aaKnown RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF814B7Z6K7 855 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 PLGP00747 810 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 TP53P04637 393 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 LYNP07948 512 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF43P17038 809 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 SLC6A6P31641 620 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 MYBPC1Q00872 1141 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 RASGEF1BQ0VAM2 473 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 GINS1Q14691 196 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF239Q16600 458 aaKnown RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 TMEM236Q5W0B7 351 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 MCEMP1Q8IX19 187 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 SETD9Q8NE22 299 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 FAM57AQ8TBR7 257 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF775Q96BV0 537 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 OXGR1Q96P68 337 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 PLA2G12AQ9BZM1 189 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 INIPQ9NRY2 104 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 RASD1Q9Y272 281 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 A0A1W2PRG6 482 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 MAGEA13PA6NCF6 341 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ZAR1LA6NP61 321 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 SMAD9O15198 467 aaKnown RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 SLC19A2O60779 497 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 RAMP1O60894 148 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 VAMP5O95183 116 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 GABRA1P14867 456 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 GGT2P36268 569 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 GIPRP48546 466 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ISL1P61371 349 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 IL5RAQ01344 420 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 ZP4Q12836 540 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 FHL1Q13642 323 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 THSD4Q6ZMP0 1018 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 CD163Q86VB7 1156 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 CCDC71Q8IV32 467 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-201ENST00000340006 UEVLDQ8IX04 471 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 SLC43A2Q8N370 569 aa13.18□□□□□ -0.3
CSRP1-201ENST00000340006 FIGNL2A6NMB9 653 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 TNFAIP8O95379 198 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 UQCRC1P31930 480 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 FXYD6P3P58550 94 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 RPS4XP62701 263 aaKnown RBP13.17□□□□□ -0.3
CSRP1-201ENST00000340006 ERVK-25P63136 954 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 POU3F1Q03052 451 aaPredicted RBP13.17□□□□□ -0.3
CSRP1-201ENST00000340006 CD47Q08722 323 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 RPTNQ6XPR3 784 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 C3P1Q6ZMU1 363 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 DPY19L2P2Q6ZN68 376 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 ZNF786Q8N393 782 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 ANKK1Q8NFD2 765 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 OR2T33Q8NG76 320 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 ERMAPQ96PL5 475 aaPredicted RBP13.17□□□□□ -0.3
CSRP1-201ENST00000340006 GRHPRQ9UBQ7 328 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
CSRP1-201ENST00000340006 WDR1O75083 606 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 AQP8O94778 261 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 PPP1R3DO95685 299 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 SMSP52788 366 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
CSRP1-201ENST00000340006 EMC4Q5J8M3 183 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 SLC35F1Q5T1Q4 408 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 IQCF1Q8N6M8 205 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ADPRHL1Q8NDY3 354 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 FAM81AQ8TBF8 368 aa13.16□□□□□ -0.3
CSRP1-201ENST00000340006 ABHD3Q8WU67 409 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms