RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SVOPLQ8N434 492 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 NEU4Q8WWR8 484 aaPredicted RBP13.54□□□□□ -0.24
LINC01116-202ENST00000339037 HPS1Q92902 700 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 ANKRD27Q96NW4 1050 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 CALML5Q9NZT1 146 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 RCE1Q9Y256 329 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 ZNF443Q9Y2A4 671 aaPredicted RBP13.54□□□□□ -0.24
LINC01116-202ENST00000339037 PCDHB14Q9Y5E9 798 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 IL6P05231 212 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 BCHEP06276 602 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 TACSTD2P09758 323 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 PNMTP11086 282 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 ETFAP13804 333 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 ZNF43P17038 809 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 GTF2E2P29084 291 aaKnown RBP13.53□□□□□ -0.24
LINC01116-202ENST00000339037 IL2RGP31785 369 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 THBS4P35443 961 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 CRATP43155 626 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 NPRL3Q12980 569 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 SPATA21Q7Z572 469 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 MYPOPQ86VE0 399 aaPredicted RBP13.53□□□□□ -0.24
LINC01116-202ENST00000339037 ZCCHC24Q8N2G6 241 aaKnown RBP13.53□□□□□ -0.24
LINC01116-202ENST00000339037 KDM8Q8N371 416 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 LINC01356Q8N9X3 169 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 MFSD8Q8NHS3 518 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 STK35Q8TDR2 534 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 VPS33AQ96AX1 596 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 SLC25A36Q96CQ1 311 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 CACYBPQ9HB71 228 aaKnown RBP13.53□□□□□ -0.24
LINC01116-202ENST00000339037 SDR39U1Q9NRG7 319 aaPredicted RBP13.53□□□□□ -0.24
LINC01116-202ENST00000339037 ZIM2Q9NZV7 527 aa13.53□□□□□ -0.24
LINC01116-202ENST00000339037 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
LINC01116-202ENST00000339037 IGHV2OR16-5A0A0B4J2B6 119 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 RPL36A-HNRNPH2H7BZ11 118 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 ERLIN1O75477 346 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 CBR1P16152 277 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 ARR3P36575 388 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 CLDN17P56750 224 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 ARF1P84077 181 aaKnown RBP13.52□□□□□ -0.25
LINC01116-202ENST00000339037 RPS26P11Q5JNZ5 115 aaPredicted RBP13.52□□□□□ -0.25
LINC01116-202ENST00000339037 SERPINA11Q86U17 422 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF786Q8N393 782 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 SLC38A5Q8WUX1 472 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 C1orf159Q96HA4 380 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 DOK1Q99704 481 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF232Q9UNY5 417 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 MGAM2Q2M2H8 2515 aa13.52□□□□□ -0.25
LINC01116-202ENST00000339037 MEGF8Q7Z7M0 2845 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 SH3PXD2BA1X283 911 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 UBDO15205 165 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 SLC43A1O75387 559 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF432O94892 652 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 ANP32DO95626 131 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 ZCCHC18P0CG32 403 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 IFNGR1P15260 489 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 RPS5P46782 204 aaKnown RBP13.51□□□□□ -0.25
LINC01116-202ENST00000339037 CAPZA2P47755 286 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
LINC01116-202ENST00000339037 CDH15P55291 814 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 DSTNP60981 165 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 SNTB2Q13425 540 aaKnown RBP13.51□□□□□ -0.25
LINC01116-202ENST00000339037 ADRM1Q16186 407 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 CDK20Q8IZL9 346 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 GPR137CQ8N3F9 429 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 UBASH3BQ8TF42 649 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 CKAP2Q8WWK9 683 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 TMEM19Q96HH6 336 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 PTDSS2Q9BVG9 487 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 SPATA9Q9BWV2 254 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 NOX3Q9HBY0 568 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 CRLF2Q9HC73 371 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 B3GAT1Q9P2W7 334 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 SEC14L4Q9UDX3 406 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 CHST2Q9Y4C5 530 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 USH1CQ9Y6N9 552 aa13.51□□□□□ -0.25
LINC01116-202ENST00000339037 TMEM247A6NEH6 219 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF503-AS2A6NEH8 195 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 ITGA2P17301 1181 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 PCMT1P22061 227 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 EGR4Q05215 589 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 RIN1Q13671 783 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 C1DQ13901 141 aaKnown RBP13.5□□□□□ -0.25
LINC01116-202ENST00000339037 CCNIQ14094 377 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 DAG1Q14118 895 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 TRIP10Q15642 601 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 CEACAM16Q2WEN9 425 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 C6orf10Q5SRN2 563 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 EPGNQ6UW88 154 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 UGT2A3Q6UWM9 527 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 MSANTD1Q6ZTZ1 278 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 MDP1Q86V88 176 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 CCDC36Q8IYA8 594 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 MIER2Q8N344 545 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms