RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 RFKQ969G6 155 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DDIT4LQ96D03 193 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ZMYND19Q96E35 227 aaPredicted RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 YIPF6Q96EC8 236 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TMEM41AQ96HV5 264 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 C5orf34Q96MH7 638 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 IP6K3Q96PC2 410 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 OR5B2Q96R09 309 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TBX5Q99593 518 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TEAD3Q99594 435 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ASPNQ9BXN1 380 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MRPS18AQ9NVS2 196 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 ASB6Q9NWX5 421 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TEKT2Q9UIF3 430 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DKKL1Q9UK85 242 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DIMT1Q9UNQ2 313 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 LSM2Q9Y333 95 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 DCHS1Q96JQ0 3298 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ASPMQ8IZT6 3477 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 AKAP13Q12802 2813 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 OR2M5A3KFT3 312 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 FAM47E-STBD1D6RA91 191 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MS4A18H0YCH9 400 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 H3BMQ9 156 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 EFSO43281 561 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 LRRTM2O43300 516 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RNF13O43567 381 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 OR2T1O43869 369 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RAMP1O60894 148 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 CBR3O75828 277 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 IFNGP01579 166 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 SPI1P17947 270 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 PAICSP22234 425 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 SDHAP31040 664 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 PYCR1P32322 319 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ATP6V1E1P36543 226 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TGFBR1P36897 503 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 HCCSP53701 268 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DSCR4P56555 118 aaPredicted RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 LSM3P62310 102 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 RUNX1T1Q06455 604 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 FOXO1Q12778 655 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RAB40BQ12829 278 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 AQP6Q13520 282 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 KRR1Q13601 381 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 ACKR1Q16570 336 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TMEM44Q2T9K0 475 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MS4A18Q3C1V0 323 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 KLHL22Q53GT1 634 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 OTPQ5XKR4 325 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 C3orf33Q6P1S2 294 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 GID4Q8IVV7 300 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 SLC43A2Q8N370 569 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 GTPBP8Q8N3Z3 284 aaPredicted RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 RFLNBQ8N5W9 214 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 NANOGP1Q8N7R0 232 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MFSD8Q8NHS3 518 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 SMPDL3BQ92485 455 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 FCGR1BQ92637 280 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ZBTB8AQ96BR9 441 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 COG8Q96MW5 612 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 UTP23Q9BRU9 249 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 ZNF649Q9BS31 505 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DCUN1D5Q9BTE7 237 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TTTY10Q9BZA0 68 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 NMNAT2Q9BZQ4 307 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 FGF20Q9NP95 211 aaPredicted RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 RPRD1BQ9NQG5 326 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 SERINC1Q9NRX5 453 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 INIPQ9NRY2 104 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MRPL39Q9NYK5 338 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 TNFRSF10DQ9UBN6 386 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 GRHPRQ9UBQ7 328 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 KLHL21Q9UJP4 597 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ERGIC3Q9Y282 383 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 EXOGQ9Y2C4 368 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 CSAG2Q9Y5P2 127 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 PNMA8CA0A1B0GUJ8 204 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 A0A1W2PPW3 197 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 SNTNA6NMZ2 147 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 C12orf71A8MTZ7 269 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 J3QRE1 110 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 MYL12BO14950 172 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 MAGEB4O15481 346 aaPredicted RBP3.71□□□□□ -1.81
MCF2-201ENST00000338585 ARHGEF9O43307 516 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 IDH3BO43837 385 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 TRMUO75648 421 aaKnown RBP3.71□□□□□ -1.81
MCF2-201ENST00000338585 OR6A2O95222 327 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 GPANK1O95872 356 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 TXNDC12O95881 172 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 LALBAP00709 142 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 IGHA1P01876 353 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 TFP02787 698 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 CELA3AP09093 270 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 APEHP13798 732 aaKnown RBP3.71□□□□□ -1.81
MCF2-201ENST00000338585 CD36P16671 472 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 CNR1P21554 472 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 TTKP33981 857 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 ACVR1BP36896 505 aa3.71□□□□□ -1.81
MCF2-201ENST00000338585 CASRP41180 1078 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms