RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 LRRC46Q96FV0 321 aa13.66□□□□□ -0.22
SEC13-201ENST00000337354 FAM46AQ96IP4 442 aaKnown RBP13.66□□□□□ -0.22
SEC13-201ENST00000337354 NDEL1Q9GZM8 345 aa13.66□□□□□ -0.22
SEC13-201ENST00000337354 KCNJ16Q9NPI9 418 aa13.66□□□□□ -0.22
SEC13-201ENST00000337354 JKAMPQ9P055 326 aa13.66□□□□□ -0.22
SEC13-201ENST00000337354 OR6C65A6NJZ3 312 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 A8MXE2 369 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 CDC42EP2O14613 210 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 KLF4O43474 513 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 RNF13O43567 381 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 AKAP8O43823 692 aaKnown RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 ENTPD5O75356 428 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 PTP4A3O75365 173 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 CNOT4O95628 575 aaKnown RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 FPR3P25089 353 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 UQCRC1P31930 480 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 GPR4P46093 362 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 PCYT1AP49585 367 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 RPS4XP62701 263 aaKnown RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 IL1RL1Q01638 556 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 TSPAN31Q12999 210 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 ZBED5Q49AG3 693 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 ZNF770Q6IQ21 691 aaPredicted RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 VWA1Q6PCB0 445 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 GIPC3Q8TF64 312 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 PYDC1Q8WXC3 89 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 NTN4Q9HB63 628 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 VNN3Q9NY84 501 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 FOXD3Q9UJU5 478 aaPredicted RBP13.65□□□□□ -0.22
SEC13-201ENST00000337354 MGAT4BQ9UQ53 548 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 RCE1Q9Y256 329 aa13.65□□□□□ -0.22
SEC13-201ENST00000337354 NPIPB13A6NJU9 1138 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 NPIPB4C9JG80 1138 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 SMNDC1O75940 238 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC13-201ENST00000337354 HPRP00739 348 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 GASTP01350 101 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 AQP2P41181 271 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 OR3A2P47893 321 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 GSSP48637 474 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 RPL18Q07020 188 aaKnown RBP13.64□□□□□ -0.23
SEC13-201ENST00000337354 COX10Q12887 443 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
SEC13-201ENST00000337354 LAPTM4AQ15012 233 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 FBXL19-AS1Q494R0 122 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 ALG10Q5BKT4 473 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 SHQ1Q6PI26 577 aaKnown RBP13.64□□□□□ -0.23
SEC13-201ENST00000337354 NHLRC1Q6VVB1 395 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 BEND4Q6ZU67 534 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 AAED1Q7RTV5 226 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 ZNF100Q8IYN0 542 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 RELL2Q8NC24 303 aaPredicted RBP13.64□□□□□ -0.23
SEC13-201ENST00000337354 OR10G2Q8NGC3 310 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 OR51A7Q8NH64 312 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 STMN2Q93045 179 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 ZNF385AQ96PM9 386 aaKnown RBP13.64□□□□□ -0.23
SEC13-201ENST00000337354 TNFRSF13CQ96RJ3 184 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 DGCR6LQ9BY27 220 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 S100A14Q9HCY8 104 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 SIGLEC7Q9Y286 467 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 ICE1Q9Y2F5 2266 aa13.64□□□□□ -0.23
SEC13-201ENST00000337354 SPTBN1Q01082 2364 aaKnown RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 UNC119BA6NIH7 251 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 ANKRD65E5RJM6 399 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 C11orf98E9PRG8 122 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 H3BNX3 289 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 GSTM3P21266 225 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 ASCL1P50553 236 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 IST1P53990 364 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 POU3F1Q03052 451 aaPredicted RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 CD300LDQ6UXZ3 194 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 HIPK1Q86Z02 1210 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 ZNF610Q8N9Z0 462 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 AQP11Q8NBQ7 271 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 OR9Q2Q8NGE9 314 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 OR13C2Q8NGS9 318 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 OR5K1Q8NHB7 308 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 LRTOMTQ8WZ04 291 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 APH1AQ96BI3 265 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 CENPNQ96H22 339 aaPredicted RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 ADAD1Q96M93 576 aaKnown RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 GPA33Q99795 319 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 UCK2Q9BZX2 261 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 INIPQ9NRY2 104 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 ELOVL5Q9NYP7 299 aa13.63□□□□□ -0.23
SEC13-201ENST00000337354 PDP1Q9P0J1 537 aaPredicted RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 KLF2Q9Y5W3 355 aaPredicted RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
SEC13-201ENST00000337354 NCOA6Q14686 2063 aaPredicted RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 TRAV27A0A087WT01 109 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 ZNF726A6NNF4 738 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 EEF1E1-BLOC1S5C9J1V9 151 aa13.62□□□□□ -0.23
SEC13-201ENST00000337354 EEF1E1O43324 174 aaKnown RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 TRAF3IP2O43734 574 aaPredicted RBP13.62□□□□□ -0.23
SEC13-201ENST00000337354 NDUFB2O95178 105 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms