RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ATOH1Q92858 354 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 MAP3K3Q99759 626 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CPPED1Q9BRF8 314 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM59Q9BXS4 323 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ALOXE3Q9BYJ1 711 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CRLF2Q9HC73 371 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ACSS1Q9NUB1 689 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CLEC2DQ9UHP7 191 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 A0A0U1RQS6 177 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TOX4O94842 621 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TIMP2P16035 220 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 IL2RGP31785 369 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OPRD1P41143 372 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 SERINC5Q86VE9 423 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 MKXQ8IYA7 352 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 RNF175Q8N4F7 328 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 LIPHQ8WWY8 451 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 WWTR1Q9GZV5 400 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TOLLIPQ9H0E2 274 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 PLSCR3Q9NRY6 295 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 AK3Q9UIJ7 227 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 MRPS28Q9Y2Q9 187 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ETV7Q9Y603 341 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 P04436 131 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TACR3P29371 465 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 SMAD2Q15796 467 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 DEFB110Q30KQ9 67 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 PM20D1Q6GTS8 502 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OR2T2Q6IF00 324 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 SLC43A2Q8N370 569 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 NKX2-4Q9H2Z4 354 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 C1orf198Q9H425 327 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF586Q9NXT0 402 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ACAD8Q9UKU7 415 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 GPR34Q9UPC5 381 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ARHGEF28Q8N1W1 1705 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 KIF1AQ12756 1690 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 A0A087WUU8 490 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 LOC102724200A0A096LPH7 203 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 H7BYZ3 331 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CR2P20023 1033 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CALCRP30988 508 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 PIGAP37287 484 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CSNK1A1P48729 337 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 SNTB1Q13884 538 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 FOXB2Q5VYV0 432 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 Q6ZTK2 550 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OR5AR1Q8NGP9 310 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OR4A16Q8NH70 328 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 NEIL2Q969S2 332 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM18Q96B42 140 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 HRASLS5Q96KN8 279 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 SLC2A11Q9BYW1 496 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 MOB1AQ9H8S9 216 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 GAR1Q9NY12 217 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 MYOTQ9UBF9 498 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM200CA6NKL6 621 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF593O00488 134 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 HSD17B6O14756 317 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 LPLP06858 475 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ACKR3P25106 362 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 TRIM61Q5EBN2 209 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OPN5Q6U736 354 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ESPNLQ6ZVH7 1005 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 APCDD1Q8J025 514 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 MYH7BA7E2Y1 1941 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 A8MVM7 634 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 PDGFBP01127 241 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-201ENST00000334504 F13BP05160 661 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 NAGAP17050 411 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 UBE2G2P60604 165 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF90Q03938 601 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 MEP1BQ16820 701 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 KIAA0895LQ68EN5 471 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 CNKSR3Q6P9H4 555 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 OR52R1Q8NGF1 315 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 TRDV1A0A1B0GX56 115 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 BLVRBP30043 206 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RAD52P43351 418 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 CPXM2Q8N436 756 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 LMNTD1Q8N9Z9 388 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SELENOIQ9C0D9 397 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 ZCCHC4Q9H5U6 513 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 PARD6AQ9NPB6 346 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 H7C1C5 153 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 OR2F2O95006 317 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 CHRM4P08173 479 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 LCN6P62502 163 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 RAB1AP62820 205 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SRPXP78539 464 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 OR2F1Q13607 317 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 Q499Y3 187 aa9.11□□□□□ -0.95
COL4A6-201ENST00000334504 TIPARPQ7Z3E1 657 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms