RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 SLC35G3Q8N808 338 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 FBRSL1Q9HCM7 1045 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 A0A1W2PPK0 400 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF814B7Z6K7 855 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 FBXO24O75426 580 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LAMP1P11279 417 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ACKR3P25106 362 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ARRB1P49407 418 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 IAH1Q2TAA2 248 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CELF2-AS1Q8N7Q2 184 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OR51F2Q8NH61 342 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DVL3Q92997 716 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NSUN5Q96P11 429 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ARHGDIGQ99819 225 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF395Q9H8N7 513 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SLC23A2Q9UGH3 650 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CCDC163A0A0D9SF12 145 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 hCG_1809904A0A1W2PP81 198 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 A0A1W2PPE2 198 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 A0A1W2PR64 198 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 A0A1W2PRV1 198 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 MPIG6BO95866 241 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 KIR2DS3Q14952 304 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 RPS26P11Q5JNZ5 115 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 C18orf63Q68DL7 685 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 Q6ZTK2 550 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OTOP2Q7RTS6 562 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 RBMXL3Q8N7X1 1067 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZFPM2Q8WW38 1151 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 BRI3BPQ8WY22 251 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CNIH4Q9P003 139 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SNED1Q8TER0 1413 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 AIFM1O95831 613 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 IGHEP01854 428 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 C21orf33P30042 268 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 P2RX1P51575 399 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 RPS25P62851 125 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SLC35A1P78382 337 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PRR11Q96HE9 360 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CABLES2Q9BTV7 478 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LNP1A1A4G5 178 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CCL16O15467 120 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GLB1P16278 677 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 USF1P22415 310 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ELAVL4P26378 380 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GRPRP30550 384 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GCH1P30793 250 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 AHRP35869 848 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 HSF1Q00613 529 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PNLIPRP3Q17RR3 467 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ISCA2Q86U28 154 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 LSMEM1Q8N8F7 131 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF516Q92618 1163 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 UCN3Q969E3 161 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SEC11CQ9BY50 192 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TTTY10Q9BZA0 68 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SLC25A18Q9H1K4 315 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 DDX31Q9H8H2 851 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PARD6AQ9NPB6 346 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 AJAP1Q9UKB5 411 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SCN11AQ9UI33 1791 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 KDM4FA0A1W2PPD8 638 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PRAMEF27A3QJZ7 478 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 USP2O75604 605 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CTXN1P60606 82 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TGFBR3Q03167 851 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PIP5KL1Q5T9C9 394 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PRAMEF9Q5VWM5 478 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZFP41Q8N8Y5 198 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TSTD1Q8NFU3 115 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 HCAR1Q9BXC0 346 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TEX101Q9BY14 249 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 STRADBQ9C0K7 418 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 OR52A1Q9UKL2 312 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 LRP6O75581 1613 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SLC31A2O15432 143 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 MMP15P51511 669 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 FCRLAQ7L513 359 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZBTB44Q8NCP5 570 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CLEC4CQ8WTT0 213 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 DPH7Q9BTV6 452 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 DEFB126Q9BYW3 111 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SMDT1Q9H4I9 107 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 MANBALQ9NQG1 85 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PLEK2Q9NYT0 353 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 KCNK6Q9Y257 313 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TMEM265A0A087WTH1 108 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 KCNQ2O43526 872 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ARAFP10398 606 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 HAPLN1P10915 354 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CCNOP22674 350 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RPS18P62269 152 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF343Q6P1L6 599 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 LSRQ86X29 649 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 KHSRPQ92945 711 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ACTR3CQ9C0K3 210 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SIRT7Q9NRC8 400 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SLCO3A1Q9UIG8 710 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 YIPF1Q9Y548 306 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RGPD1P0DJD0 1748 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms