RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TBC1D3BA6NDS4 549 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TBC1D3FA6NER0 549 aaPredicted RBP12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 SCAMP1O15126 338 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 UBXN2BQ14CS0 331 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 YOD1Q5VVQ6 348 aaPredicted RBP12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TBC1D3GQ6DHY5 549 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TMEM17Q86X19 198 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TMEM185AQ8NFB2 350 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 OR2A1Q8NGT9 310 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 SLC2A12Q8TD20 617 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 DUSP19Q8WTR2 217 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 NCDNQ9UBB6 729 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 YBX2Q9Y2T7 364 aaKnown RBP12.6□□□□□ -0.39
SYNE3-201ENST00000334258 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.6□□□□□ -0.39
SYNE3-201ENST00000334258 SLC22A7Q9Y694 548 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 DISC1C4P0D8 188 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 HPP00738 406 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 FABP1P07148 127 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 RNF224P0DH78 156 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 TMIGD3P0DMS9 266 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 GTF2F2P13984 249 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 AK4P27144 223 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 MRPS10P82664 201 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 LRRC37A5PQ49AS3 106 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 OLFML2AQ68BL7 652 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 NRROSQ86YC3 692 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 CXorf40AQ8TE69 158 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 RAB40AQ8WXH6 277 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ARRDC3Q96B67 414 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 SDHAF3Q9NRP4 125 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 CES1P1Q9UKY3 287 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 IER3IP1Q9Y5U9 82 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF749O43361 778 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 SELENOFO60613 162 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 PCDH8O95206 1070 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 HIST1H1CP16403 213 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 CALCRP30988 508 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 MEOX2P50222 304 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ARFIP1P53367 373 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 FNDC3BQ53EP0 1204 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ARHGAP11AQ6P4F7 1023 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 TMED4Q7Z7H5 227 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 GLB1L2Q8IW92 636 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 LRRC25Q8N386 305 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 COX18Q8N8Q8 333 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 BPIFCQ8NFQ6 507 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 LGR4Q9BXB1 951 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF768Q9H5H4 540 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 MEPEQ9NQ76 525 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ACTR10Q9NZ32 417 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 SLC6A5Q9Y345 797 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 STMND1H3BQB6 276 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 SPINT1O43278 529 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 AGR2O95994 175 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 SLC2A5P22732 501 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 PPP2CBP62714 309 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 PPP2CAP67775 309 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ODF4Q2M2E3 257 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 STPG1Q5TH74 334 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 METRNLQ641Q3 311 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 TMPRSS11FQ6ZWK6 438 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 SYS1Q8N2H4 156 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 OR51S1Q8NGJ8 323 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 OR4C16Q8NGL9 310 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 CMTM3Q96MX0 182 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 GFI1Q99684 422 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 PRSS16Q9NQE7 514 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 EXOSC3Q9NQT5 275 aaKnown RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF281Q9Y2X9 895 aa12.59□□□□□ -0.39
SYNE3-201ENST00000334258 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
SYNE3-201ENST00000334258 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.39
SYNE3-201ENST00000334258 EPOPA6NHQ4 379 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 LINC01565O15544 149 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 MAS1P04201 325 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ANXA2P07355 339 aaKnown RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ERGP11308 486 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ADRB3P13945 408 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 HOXA1P49639 335 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 RAB28P51157 221 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 AKR1C2P52895 323 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 EEF1A1P68104 462 aaKnown RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 AKR1C1Q04828 323 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 HYAL4Q2M3T9 481 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 MRM1Q6IN84 353 aaKnown RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 KRT77Q7Z794 578 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 KCT2Q8NC54 265 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF707Q96C28 371 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms