RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TIFAQ96CG3 184 aa16.66■□□□□ 0.26
PKP3-201ENST00000331563 ACSS1Q9NUB1 689 aaPredicted RBP16.66■□□□□ 0.26
PKP3-201ENST00000331563 ACOD1A6NK06 481 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 TERTO14746 1132 aaKnown RBP16.65■□□□□ 0.26
PKP3-201ENST00000331563 HEXAP06865 529 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 EDNRAP25101 427 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 WASP42768 502 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 POU3F4P49335 361 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 NUBP1P53384 320 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 IL10RAQ13651 578 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 H3F3CQ6NXT2 135 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 OR2W3Q7Z3T1 314 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 TRAPPC5Q8IUR0 188 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 DUSP19Q8WTR2 217 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ADGRL4Q9HBW9 690 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ASH2LQ9UBL3 628 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ST6GALNAC2Q9UJ37 374 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 MOKQ9UQ07 419 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 C2orf16Q68DN1 1984 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 C17orf113A0A1B0GUU1 675 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 LRIT2A6NDA9 550 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 IFITM5A6NNB3 132 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 C5orf67F2Z3F1 127 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ACTR1BP42025 376 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 C21orf62-AS1Q17RA5 79 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ZNF805Q5CZA5 627 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 NUDT18Q6ZVK8 323 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 NUDT13Q86X67 352 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 CCDC116Q8IYX3 515 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 BEST3Q8N1M1 668 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 SNX33Q8WV41 574 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 SMIM19Q96E16 107 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 GNG8Q9UK08 70 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ATXN7L1Q9ULK2 861 aaPredicted RBP16.65■□□□□ 0.26
PKP3-201ENST00000331563 FOXJ3Q9UPW0 622 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 RFPL4AA6NLU0 287 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 RIIAD1A6NNX1 92 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 RFPL4AL1F8VTS6 287 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ZNF749O43361 778 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 FGF19O95750 216 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 C8orf89P0DMQ9 161 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 HPGDP15428 266 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 BDKRB2P30411 391 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ZNF750Q32MQ0 723 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 FNDC3BQ53EP0 1204 aaKnown RBP16.65■□□□□ 0.26
PKP3-201ENST00000331563 C9orf64Q5T6V5 341 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 SLC36A1Q7Z2H8 476 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ARL14Q8N4G2 192 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 ARHGDIGQ99819 225 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 SLC38A1Q9H2H9 487 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 CCDC86Q9H6F5 360 aaKnown RBP16.65■□□□□ 0.26
PKP3-201ENST00000331563 EXO5Q9H790 373 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
PKP3-201ENST00000331563 SYT5O00445 386 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 PHYHO14832 338 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 RBBP9O75884 186 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 THY1P04216 161 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 FOLR2P14207 255 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 PSMB10P40306 273 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 MAGEB1P43366 347 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 TAS2R38P59533 333 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 RPS15P62841 145 aaKnown RBP16.64■□□□□ 0.25
PKP3-201ENST00000331563 FOXK2Q01167 660 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 FABP9Q0Z7S8 132 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 AGERQ15109 404 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 TANGO2Q6ICL3 276 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 ZCCHC12Q6PEW1 402 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 KRT77Q7Z794 578 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 AMER3Q8N944 861 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 HS6ST2Q96MM7 605 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 ALX4Q9H161 411 aaPredicted RBP16.64■□□□□ 0.25
PKP3-201ENST00000331563 PLEKHA6Q9Y2H5 1048 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 A0A0D9SG52 128 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 RHPN2P1A8MT19 583 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 LINC01565O15544 149 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 KLF4O43474 513 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 ELFN1P0C7U0 828 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 PRLHRP49683 370 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 ST8SIA6P61647 398 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 CCINQ13939 588 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 OR51L1Q8NGJ5 315 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 OR4C6Q8NH72 309 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 WDR13Q9H1Z4 485 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 SYNPO2LQ9H987 977 aa16.64■□□□□ 0.25
PKP3-201ENST00000331563 SIDT1Q9NXL6 827 aaKnown RBP16.64■□□□□ 0.25
PKP3-201ENST00000331563 LOC390937A0A1W2PQ73 354 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 SLC25A12O75746 678 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 STATHP02808 62 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 LAP3P28838 519 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 NAA10P41227 235 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 FRKP42685 505 aaPredicted RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 TAS2R20P59543 309 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 PPIAP62937 165 aaKnown RBP16.63■□□□□ 0.25
PKP3-201ENST00000331563 CRMP1Q14194 572 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 CDK5R1Q15078 307 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 SSX2Q16385 188 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 CSRP2Q16527 193 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 OR4C16Q8NGL9 310 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 OTUB2Q96DC9 234 aa16.63■□□□□ 0.25
PKP3-201ENST00000331563 ASB16Q96NS5 453 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms