RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 OR6C68A6NDL8 312 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 FGF18O76093 207 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2A4O95047 310 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 ADH5P11766 374 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 CENPAP49450 140 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 EMDP50402 254 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 PRRT3Q5FWE3 981 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 BEST3Q8N1M1 668 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 SLITRK2Q9H156 845 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 ASF1BQ9NVP2 202 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 DPP7Q9UHL4 492 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF281Q9Y2X9 895 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 LRRK1Q38SD2 2015 aa13.09□□□□□ -0.31
CHRNA3-201ENST00000326828 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 ITGA10O75578 1167 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 NAT2P11245 290 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 CPN1P15169 458 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 CD53P19397 219 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 RBMS2Q15434 407 aaKnown RBP13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 NKPD1Q17RQ9 610 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 FAM219AQ8IW50 185 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 SMARCD2Q92925 531 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 NKD1Q969G9 470 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 GLS2Q9UI32 602 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 F5P12259 2224 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 LINC01387J3KSC0 135 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 CTDSPLO15194 276 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 SP3Q02447 781 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 DUSP8Q13202 625 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 ARHGAP11BQ3KRB8 267 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 ZNF676Q8N7Q3 588 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 POFUT1Q9H488 388 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 STARD5Q9NSY2 213 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 ACTR10Q9NZ32 417 aa13.08□□□□□ -0.32
CHRNA3-201ENST00000326828 TUBAL3A6NHL2 446 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 LDOC1O95751 146 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 DBIP07108 87 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ACRP10323 421 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ERGP11308 486 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 CCR4P51679 360 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 UBE2IP63279 158 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ELFN2Q5R3F8 820 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 PRAMEF8Q5VWM4 474 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 PRAMEF7Q5VXH5 474 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 LEG1Q6P5S2 330 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 HAGHLQ6PII5 290 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 POMZP3Q6PJE2 187 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ZNF627Q7L945 461 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 TEX19Q8NA77 164 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 CPNE2Q96FN4 548 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 USB1Q9BQ65 265 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 PELOQ9BRX2 385 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ATPIF1Q9UII2 106 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 PRELID3BQ9Y3B1 194 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 EYSQ5T1H1 3165 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 MTRF1O75570 445 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 HPP00738 406 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 HSD17B2P37059 387 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ZNF234Q14588 700 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 TMPRSS11FQ6ZWK6 438 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 TMEM106AQ96A25 262 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 EMC3Q9P0I2 261 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 CTNSO60931 367 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 GLAP06280 429 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 PEBP1P30086 187 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 FAUP35544 74 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 RUNX2Q13950 521 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 SERTAD2Q14140 314 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 ZIC1Q15915 447 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 LIPNQ5VXI9 398 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 HSD17B13Q7Z5P4 300 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 OR5AK2Q8NH90 309 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 LCORQ96JN0 433 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 KLHDC2Q9Y2U9 406 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 NOTCH4Q99466 2003 aa13.07□□□□□ -0.32
CHRNA3-201ENST00000326828 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 ASCC3Q8N3C0 2202 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 PTP4A3O75365 173 aa13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 F13BP05160 661 aa13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 SPI1P17947 270 aa13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 RNF113BQ8IZP6 322 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-201ENST00000326828 LCN9Q8WX39 176 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms