RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TXNDC15Q96J42 360 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 IL4I1Q96RQ9 567 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 GABARAPL3Q9BY60 117 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 TIGARQ9NQ88 270 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 B3GAT1Q9P2W7 334 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 CORINQ9Y5Q5 1042 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 ALPK2Q86TB3 2170 aa13.75□□□□□ -0.21
PDLIM5-202ENST00000318007 TEX13CA0A0J9YWL9 993 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 AQP7P3A6NL99 342 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 SYNGR4O95473 234 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 IFNGR1P15260 489 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 P2RY4P51582 365 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 PRPS1P60891 318 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 MYBPC1Q00872 1141 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 TAF11Q15544 211 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 EMC4Q5J8M3 183 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 NCCRP1Q6ZVX7 275 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 CCDC71Q8IV32 467 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 CYB561A3Q8NBI2 242 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 LSM14AQ8ND56 463 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 OR4K13Q8NH42 304 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 DNAJC9Q8WXX5 260 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 Q96M85 177 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 MUS81Q96NY9 551 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 TSPAN32Q96QS1 320 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 RASSF4Q9H2L5 321 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 FN3KQ9H479 309 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 MCTS1Q9ULC4 181 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 GTF3C1Q12789 2109 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 ZGRF1Q86YA3 2104 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 FAM183AA6NL82 134 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 CPN1P15169 458 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 ZNF43P17038 809 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC6A6P31641 620 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 GIPRP48546 466 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 ESRRGP62508 458 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 H3F3AP84243 136 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 MFSD13AQ14CX5 517 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 ACKR1Q16570 336 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 ZPLD1Q8TCW7 415 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 LIPHQ8WWY8 451 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 PRDM14Q9GZV8 571 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 RERGLQ9H628 205 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 INIPQ9NRY2 104 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 B3GALT5Q9Y2C3 310 aa13.74□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC22A20A6NK97 555 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 BHLHE40O14503 412 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 EIF1BO60739 113 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 IGF2P01344 180 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 CAPGP40121 348 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 AGFG1P52594 562 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 IL5RAQ01344 420 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 RASGEF1BQ0VAM2 473 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 PGGHGQ32M88 737 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 KRTCAP3Q53RY4 240 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 P4HA3Q7Z4N8 544 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 UEVLDQ8IX04 471 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 SCAIQ8N9R8 606 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 SYT14Q8NB59 555 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 TFAP2CQ92754 450 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 NAA11Q9BSU3 229 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 MED20Q9H944 212 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 C8orf4Q9NR00 106 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 GRHPRQ9UBQ7 328 aa13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 ZNF346Q9UL40 294 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-202ENST00000318007 ZAR1LA6NP61 321 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC19A2O60779 497 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 SMSP52788 366 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 BIDP55957 195 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 CLDN17P56750 224 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 RUNX1T1Q06455 604 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 SNAPC1Q16533 368 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 BCL2A1Q16548 175 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 CASP12Q6UXS9 341 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 LRRC75AQ8NAA5 344 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 OR52E2Q8NGJ4 325 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 NMNAT3Q96T66 252 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 CALHM2Q9HA72 323 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 IMPAD1Q9NX62 359 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 A0A1W2PRG6 482 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 PRKYO43930 277 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 IGHV3-9P01782 118 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 GYPBP06028 91 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 ADARB1P78563 741 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 CDK5Q00535 292 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 MRPL49Q13405 166 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 CAMK2DQ13557 499 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 SLC35D2Q76EJ3 337 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 TUSC5Q8IXB3 177 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 PM20D2Q8IYS1 436 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 TCEANCQ8N8B7 351 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 CNIH3Q8TBE1 160 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 FOXN4Q96NZ1 517 aa13.72□□□□□ -0.21
PDLIM5-202ENST00000318007 C12orf49Q9H741 205 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms