RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 M0QX08 132 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 FMO6PO60774 539 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 ZNF432O94892 652 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 C8BP07358 591 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 VIMP08670 466 aaKnown RBP15.5■□□□□ 0.07
TPM1-203ENST00000317516 CBLP22681 906 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 LGALS3BPQ08380 585 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 DMTNQ08495 405 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 C3orf36Q3SXR2 165 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 COMTD1Q86VU5 262 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 UEVLDQ8IX04 471 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 CCDC36Q8IYA8 594 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 C10orf53Q8N6V4 93 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 FAM169BQ8N8A8 192 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 SCAIQ8N9R8 606 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 KATNB1Q9BVA0 655 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 KLHL14Q9P2G3 628 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 B3GAT1Q9P2W7 334 aa15.5■□□□□ 0.07
TPM1-203ENST00000317516 FN1P02751 2386 aaKnown RBP15.5■□□□□ 0.07
TPM1-203ENST00000317516 A0A096LPE4 126 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 A0A1W2PPZ6 126 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 VSTM5A8MXK1 200 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 H2AFXP16104 143 aaPredicted RBP15.49■□□□□ 0.07
TPM1-203ENST00000317516 PCBP3P57721 371 aaKnown RBP15.49■□□□□ 0.07
TPM1-203ENST00000317516 MTPNP58546 118 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 PMS2P3Q13401 168 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 INTS11Q5TA45 600 aaKnown RBP15.49■□□□□ 0.07
TPM1-203ENST00000317516 ZNF613Q6PF04 617 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 PATL1Q86TB9 770 aaKnown RBP15.49■□□□□ 0.07
TPM1-203ENST00000317516 PTOV1Q86YD1 416 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 SMYD1Q8NB12 490 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 MAPK1IP1LQ8NDC0 245 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 SLC26A7Q8TE54 656 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 SLC41A3Q96GZ6 507 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 MCHR1Q99705 422 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 SH3GL1Q99961 368 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 TMEM43Q9BTV4 400 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 ZNF385DQ9H6B1 395 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 GPR35Q9HC97 309 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 SEC14L4Q9UDX3 406 aa15.49■□□□□ 0.07
TPM1-203ENST00000317516 IGHV1-18A0A0C4DH31 117 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 MS4A18H0YCH9 400 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 CDH12P55289 794 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 ARF1P84077 181 aaKnown RBP15.48■□□□□ 0.07
TPM1-203ENST00000317516 CYLC2Q14093 348 aaPredicted RBP15.48■□□□□ 0.07
TPM1-203ENST00000317516 DUSP7Q16829 419 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 MS4A18Q3C1V0 323 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 LINGO2Q7L985 606 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 RETREG3Q86VR2 466 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 SNX32Q86XE0 403 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 OR10H5Q8NGA6 315 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 RASSF5Q8WWW0 418 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 LRR1Q96L50 414 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 KAT8Q9H7Z6 458 aaKnown RBP15.48■□□□□ 0.07
TPM1-203ENST00000317516 CRLF2Q9HC73 371 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 B3GAT2Q9NPZ5 323 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 MRPL39Q9NYK5 338 aaKnown RBP15.48■□□□□ 0.07
TPM1-203ENST00000317516 CRNNQ9UBG3 495 aaPredicted RBP15.48■□□□□ 0.07
TPM1-203ENST00000317516 NOX1Q9Y5S8 564 aa15.48■□□□□ 0.07
TPM1-203ENST00000317516 JMJD1CQ15652 2540 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 ZNF726A6NNF4 738 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 TLX2O43763 284 aaPredicted RBP15.47■□□□□ 0.07
TPM1-203ENST00000317516 TPST2O60704 377 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 OR6A2O95222 327 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 MT-ATP6P00846 226 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 CSF3P09919 207 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 TROVE2P10155 538 aaKnown RBP eCLIP15.47■□□□□ 0.07
TPM1-203ENST00000317516 CBR1P16152 277 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 SERPINF1P36955 418 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 EFNA4P52798 201 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 PUDPQ08623 228 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 CEACAM16Q2WEN9 425 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 OR4F15Q8NGB8 312 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 OR10A6Q8NH74 314 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 FBXO17Q96EF6 278 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 OR2M2Q96R28 347 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 ARHGDIGQ99819 225 aa15.47■□□□□ 0.07
TPM1-203ENST00000317516 FBXO9Q9UK97 447 aaPredicted RBP15.47■□□□□ 0.07
TPM1-203ENST00000317516 ZNF99A8MXY4 864 aaPredicted RBP15.46■□□□□ 0.07
TPM1-203ENST00000317516 M0R3H8 397 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 TRAF3IP2O43734 574 aaPredicted RBP15.46■□□□□ 0.07
TPM1-203ENST00000317516 CHP2O43745 196 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 CRLF1O75462 422 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 F12P00748 615 aaPredicted RBP15.46■□□□□ 0.07
TPM1-203ENST00000317516 IGLV1-44P01699 117 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 BGLAPP02818 100 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 SLC25A16P16260 332 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 AHCYP23526 432 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 ARR3P36575 388 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 SNRPD2P62316 118 aaKnown RBP15.46■□□□□ 0.07
TPM1-203ENST00000317516 NAAAQ02083 359 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 PXKQ7Z7A4 578 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 TMEM123Q8N131 208 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 IL17RDQ8NFM7 739 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 FAM168AQ92567 244 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 WFDC6Q9BQY6 131 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 CA10Q9NS85 328 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 PLCE1Q9P212 2302 aa15.46■□□□□ 0.07
TPM1-203ENST00000317516 IGHV4-30-2A0A087WSY4 118 aa15.45■□□□□ 0.06
TPM1-203ENST00000317516 B9A039 149 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms