RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SFXN4Q6P4A7 337 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 OR56B1Q8NGI3 324 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 OR13C9Q8NGT0 318 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 UBQLN3Q9H347 655 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 SEMA4GQ9NTN9 838 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 CTGFP29279 349 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 ALDH3B2P48448 385 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 DUSP5Q16690 384 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 IL1F10Q8WWZ1 152 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 EHFQ9NZC4 300 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 C19orf53Q9UNZ5 99 aaPredicted RBP14.72□□□□□ -0.05
USP42-201ENST00000306177 PIP5K1CO60331 668 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 LIPCP11150 499 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 TEAD1P28347 426 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 SLC35D3Q5M8T2 416 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 SYT6Q5T7P8 510 aaPredicted RBP14.72□□□□□ -0.05
USP42-201ENST00000306177 MARCH3Q86UD3 253 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 LAX1Q8IWV1 398 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 DNAJC5GQ8N7S2 189 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 OR52N1Q8NH53 320 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 ZNF775Q96BV0 537 aaPredicted RBP14.72□□□□□ -0.05
USP42-201ENST00000306177 CMSS1Q9BQ75 279 aaKnown RBP14.72□□□□□ -0.05
USP42-201ENST00000306177 PRR14Q9BWN1 585 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 PADI1Q9ULC6 663 aa14.72□□□□□ -0.05
USP42-201ENST00000306177 NOSIPQ9Y314 301 aaKnown RBP14.72□□□□□ -0.05
USP42-201ENST00000306177 LGI1O95970 557 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 SHC1P29353 583 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 ELAVL1Q15717 326 aaKnown RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 DUSP7Q16829 419 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 ACTBL2Q562R1 376 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 MRPL41Q8IXM3 137 aaKnown RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 PHF7Q9BWX1 381 aaPredicted RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 SGPP1Q9BX95 441 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 NIPAL2Q9H841 368 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 TMEM184BQ9Y519 407 aaPredicted RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 DOCK1Q14185 1865 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 TRBV5-4A0A0C4DH59 114 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 POM121BA6NF01 834 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 ZNF684Q5T5D7 378 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 LCN10Q6JVE6 187 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 C22orf15Q8WYQ4 148 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 FER1L6-AS2Q96M78 137 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 C19orf43Q9BQ61 176 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 ZNF286AQ9HBT8 521 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 GPR160Q9UJ42 338 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 A0A1W2PR48 441 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 EIF4E2O60573 245 aaKnown RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 DPM1O60762 260 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 MT-CO2P00403 227 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 MT-ATP6P00846 226 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 HLA-AP01891 365 aaKnown RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 IL32P24001 234 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 TRMT12Q53H54 448 aaKnown RBP14.71□□□□□ -0.05
USP42-201ENST00000306177 ESPNLQ6ZVH7 1005 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 LGALS14Q8TCE9 139 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 NUDT8Q8WV74 236 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 ASB1Q9Y576 335 aa14.71□□□□□ -0.05
USP42-201ENST00000306177 GABARAPO95166 117 aa14.71□□□□□ -0.06
USP42-201ENST00000306177 MTCP1P56278 107 aa14.71□□□□□ -0.06
USP42-201ENST00000306177 RAB5BP61020 215 aa14.71□□□□□ -0.06
USP42-201ENST00000306177 RPP30P78346 268 aaKnown RBP14.71□□□□□ -0.06
USP42-201ENST00000306177 OR56B4Q8NH76 319 aa14.71□□□□□ -0.06
USP42-201ENST00000306177 CTRCQ99895 268 aa14.71□□□□□ -0.06
USP42-201ENST00000306177 TP53TG5Q9Y2B4 290 aa14.71□□□□□ -0.06
USP42-201ENST00000306177 HMGN4O00479 90 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 DDAH2O95865 285 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 FCGR2AP12318 317 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 TPT1P13693 172 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 ENPP1P22413 925 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 S100A12P80511 92 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 MFAP5Q13361 173 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 TNK1Q13470 666 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 YIF1BQ5BJH7 314 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 YOD1Q5VVQ6 348 aaPredicted RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 DHRS4L2Q6PKH6 230 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 BCDIN3DQ7Z5W3 292 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 PSMF1Q92530 271 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 ATOH1Q92858 354 aaPredicted RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 TMEM59Q9BXS4 323 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 PCDHGA1Q9Y5H4 931 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 PRAMEF25A6NGN4 478 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 G3V3Y1 287 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 LPLP06858 475 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 ABOP16442 354 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 CLDN6P56747 220 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 CLDN12P56749 244 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 ALKBH1Q13686 389 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 PLGLAQ15195 96 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 ARHGAP11BQ3KRB8 267 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 LYPD4Q6UWN0 246 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 CHST8Q9H2A9 424 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 MPPED1O15442 326 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 VEGFCP49767 419 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 HNRNPFP52597 415 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 CARD18P57730 90 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 RBMS2Q15434 407 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 EXT1Q16394 746 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 SLC36A2Q495M3 483 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 C1orf140Q5VVS0 124 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 NPSR1Q6W5P4 371 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms