RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PRAMEF7Q5VXH5 474 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
TRIM35-201ENST00000305364 PSRC1Q6PGN9 363 aaPredicted RBP12□□□□□ -0.49
TRIM35-201ENST00000305364 SSX6Q7RTT6 188 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 FAM122BQ7Z309 247 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 TMEM150AQ86TG1 271 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 OR10R2Q8NGX6 335 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 PTDSS2Q9BVG9 487 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ZNF629Q9UEG4 869 aaPredicted RBP12□□□□□ -0.49
TRIM35-201ENST00000305364 CYB5R1Q9UHQ9 305 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ADAM18Q9Y3Q7 739 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 PLXNB2O15031 1838 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 FNDC1Q4ZHG4 1894 aaPredicted RBP12□□□□□ -0.49
TRIM35-201ENST00000305364 AQP8O94778 261 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ABLIM3O94929 683 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 HIST1H1CP16403 213 aaKnown RBP12□□□□□ -0.49
TRIM35-201ENST00000305364 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
TRIM35-201ENST00000305364 GUCA2AQ02747 115 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 Q499Y3 187 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 GLT8D1Q68CQ7 371 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ABHD17CQ6PCB6 329 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 FAM111BQ6SJ93 734 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ZNF793Q6ZN11 406 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 TRIM2Q9C040 744 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 EPHX3Q9H6B9 360 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 SAGE1Q9NXZ1 904 aa12□□□□□ -0.49
TRIM35-201ENST00000305364 ZNF736B4DX44 427 aaPredicted RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 KCNJ13O60928 360 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 CD3DP04234 171 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 GNALP38405 381 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 BCL6P41182 706 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 RAB13P51153 203 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 GALNTL5Q7Z4T8 443 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 PARGQ86W56 976 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 GATSQ8NAP1 163 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 OR1M1Q8NGA1 313 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ZNF563Q8TA94 476 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 CCDC86Q9H6F5 360 aaKnown RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 GSKIPQ9P0R6 139 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 RNF215Q9Y6U7 377 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TBC1D3DA0A087WVF3 549 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TBC1D3IA0A087WXS9 549 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 IDSB3KWA1 339 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TBC1D3LB9A6J9 549 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 LDB3O75112 727 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TBC1D3HP0C7X1 549 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 CXADRP78310 365 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 SLC7A9P82251 487 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ENPP2Q13822 863 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 PEA15Q15121 130 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TBC1D3CQ6IPX1 549 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TBC1D3Q8IZP1 549 aaPredicted RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 BPIFB2Q8N4F0 458 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ZNF417Q8TAU3 575 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 GPR148Q8TDV2 347 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ATOH1Q92858 354 aaPredicted RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 APMAPQ9HDC9 416 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 HCFC1R1Q9NWW0 138 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 PTPRDP23468 1912 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ANKRD20A5PA0PJZ0 165 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 APODP05090 189 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ADRB3P13945 408 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 EPHA4P54764 986 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 S100A10P60903 97 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 IL13RA1P78552 427 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 TFAP2EQ6VUC0 442 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 MAMSTRQ6ZN01 415 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 SLC2A12Q8TD20 617 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 ULBP3Q9BZM4 244 aa11.99□□□□□ -0.49
TRIM35-201ENST00000305364 METTL8Q9H825 291 aaKnown RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 PRMT8Q9NR22 394 aaPredicted RBP11.99□□□□□ -0.49
TRIM35-201ENST00000305364 A0A0B4J2A0 478 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 DCDC2BA2VCK2 349 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 TO15178 435 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 SSX5O60225 188 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 RENP00797 406 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 FGF2P09038 288 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 ZNF888P0CJ79 500 aaPredicted RBP11.98□□□□□ -0.49
TRIM35-201ENST00000305364 F3P13726 295 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 LSSP48449 732 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 VEGFBP49765 207 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 IRF4Q15306 451 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 TMEM255AQ5JRV8 349 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 HAVCR1Q96D42 359 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 RBM18Q96H35 190 aaKnown RBP11.98□□□□□ -0.49
TRIM35-201ENST00000305364 SDF2Q99470 211 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 ADAT1Q9BUB4 502 aaKnown RBP11.98□□□□□ -0.49
TRIM35-201ENST00000305364 SHPKQ9UHJ6 478 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 PCDHB10Q9UN67 800 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 FOXJ3Q9UPW0 622 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 OTOFQ9HC10 1997 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 A0A1B0GWA3 101 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 IGLON5A6NGN9 336 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 GGT3PA6NGU5 568 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 TBX19O60806 448 aa11.98□□□□□ -0.49
TRIM35-201ENST00000305364 TPT1P13693 172 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms