RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 OR4D6Q8NGJ1 314 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ANGPTL6Q8NI99 470 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SLC25A32Q9H2D1 315 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF225Q9UK10 706 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 VDAC3Q9Y277 283 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 PUS1Q9Y606 427 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL3A1-201ENST00000304636 GFYI3L273 518 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 EFNA3P52797 238 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 RAB38P57729 211 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 LTB4RQ15722 352 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 MDGA2Q7Z553 956 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 RCBTB1Q8NDN9 531 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 OR51D1Q8NGF3 324 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 DVL3Q92997 716 aaPredicted RBP11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF681Q96N22 645 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 CHRDQ9H2X0 955 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 POFUT1Q9H488 388 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 FBXO7Q9Y3I1 522 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ADAM18Q9Y3Q7 739 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 PRSS38A1L453 326 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SERINC4A6NH21 518 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SBK2P0C263 348 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 MFSD12Q6NUT3 480 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 TMEM64Q6YI46 380 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 OR6M1Q8NGM8 313 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 OR9A4Q8NGU2 314 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 KCNG3Q8TAE7 436 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 TMEM59Q9BXS4 323 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 NCDNQ9UBB6 729 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 M0QYG6 137 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 PLPP1O14494 284 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SHOXO15266 292 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ADAM12O43184 909 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 GLCEO94923 617 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 HCCSP53701 268 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 DGCR2P98153 550 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 EXOSC2Q13868 293 aaKnown RBP11.89□□□□□ -0.51
COL3A1-201ENST00000304636 Q6ZTK2 550 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 DPY19L4Q7Z388 723 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ADGRE4PQ86SQ3 457 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 FRMD1Q8N878 549 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SLC30A7Q8NEW0 376 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 PLEK2Q9NYT0 353 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 MUTYHQ9UIF7 546 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 HRH3Q9Y5N1 445 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 HMGN4O00479 90 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 OR2F2O95006 317 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 IGLV3-25P01717 112 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 OR2F1Q13607 317 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RAB31Q13636 194 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 BATFQ16520 125 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 CCSMST1Q4G0I0 132 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SLC35D2Q76EJ3 337 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 TMEM100Q9NV29 134 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RARRES3Q9UL19 164 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 LRIT2A6NDA9 550 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 AKR7A2O43488 359 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 IGHG1P01857 330 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 HBE1P02100 147 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SFTPDP35247 375 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 BMPR1AP36894 532 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 FABP5Q01469 135 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 PTOV1Q86YD1 416 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 NKAIN3Q8N8D7 197 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 OR51S1Q8NGJ8 323 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 OR52I2Q8NH67 350 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 PRR14Q9BWN1 585 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 GPATCH2Q9NW75 528 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 A0A087WUU8 490 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 A6NLC8 198 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SEC14L5O43304 696 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 IGFBP1P08833 259 aaPredicted RBP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 CSNK1A1P48729 337 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SELENOVP59797 346 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 HNRNPKP61978 463 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RAB30Q15771 203 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 KCNIP4Q6PIL6 250 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 C5orf46Q6UWT4 87 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 OR52A5Q9H2C5 316 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 CHST2Q9Y4C5 530 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 ACY1Q03154 408 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 WDR88Q6ZMY6 472 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 OR10R2Q8NGX6 335 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 PLSCR3Q9NRY6 295 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 CA5BQ9Y2D0 317 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 H7C1C5 153 aa11.88□□□□□ -0.51
COL3A1-201ENST00000304636 SULT2B1O00204 365 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms